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Protein Overview: gi|25407138, gi|...

General Information:
Name(s) found: gi|7268576 [NCBI NR]
gi|4558561 [NCBI NR]
gi|25407138 [NCBI NR]
gi|19699230 [NCBI NR]
gi|17473518 [NCBI NR]
gi|15234362 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • gi|7268576|emb|CAB80685.1| putative CHP-rich zinc finger protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4558561|gb|AAD22654.1|AC007138_18 putative CHP-rich zinc finger protein [Arabidopsis thaliana] [NCBI NR]
  • pir||F85024 probable CHP-rich zinc finger protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|19699230|gb|AAL90981.1| AT4g01920/T7B11_18 [Arabidopsis thaliana] [NCBI NR]
  • gi|17473518|gb|AAL38382.1| AT4g01920/T7B11_18 [Arabidopsis thaliana] [NCBI NR]
  • gi|15234362|ref|NP_192101.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 658 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: intracellular signaling pathway [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSKGVLMPL IHEHLMMPWK NLKRGPCCGC CGRFEAISDG YYCKTCDFFV RKNCADEPSE  60
   61 YIKHPSHPKH TLQLLRPERP TNFCNLCGRM CPIFYRCDLC DFDMDLYCSK YPPPEVIDIS 120
  121 KTHHHRLTLL KKWIKQCICA KCCKIIGNEF PYNCHECDLS FHVDCVWYPP ELELRLEVNH 180
  181 SYHSLHPLKL YAKGQLPDYS DGKCRLCARK IDETFFFHCS PCNFTLDKVC VLRPPQQSLL 240
  241 NLKAHDHQLT LLPKLDSFTC NACGLKGDRS PYVCFQCGFM IHQDCLGLPR LININRHDHR 300
  301 VSRTSVLGVV NSVCGVCRKK VDWSYGGFSC QRCHGYVVHS KCATRKDVWN GKELEGLPEE 360
  361 TEDIEPYVVI DENTIQHFSH KEHYLRLNVN GVLCDDNKRC KACTHPICLQ SFYGCMDCNF 420
  421 ILHQNCAGFL RMKWHVLHNE RLTLVTNKDE GFRCYACDRL SNGFKYQHGN KAFDVRCISI 480
  481 SEPHIHPSHP NHPLYYFPSD EVQWCTGCNM EQDFVLSCIE DNCGFLLCFG CATLPQMVKH 540
  541 RVHDHPLSLC YGEKASGKYW CDICEKETNP HTWFYTCKDH QASLHTKCVL GDLSSLMRRS 600
  601 TIKIEGTSYE VVLNNSISRP FCSWCKMHCI FPIILKTLGA TNEYSCSLEC AECRYTDR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] FFAS03 2.15 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    2 View Details [133..242] PSI-BLAST 4.522879 Crystal Structure of the Human Beta2-Chimaerin
    3 View Details [243..353] MSA 2.169987 View MSA. No confident structure predictions are available.
    4 View Details [354..540] MSA 5.153988 View MSA. No confident structure predictions are available.
    5 View Details [541..658] PSI-BLAST 3.522879 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle