Protein: | gi|15226250, gi|... |
Organism: | Arabidopsis thaliana |
Length: | 718 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15226250, gi|....
Description | E-value | Query Range |
Subject Range |
|
1025.0 | [0..10] | [715..4] |
Region A: Residues: [1-325] |
1 11 21 31 41 51 | | | | | | 1 MMMKSTDESE TKWKIDDAAE LARDFWLERD GISALKLTEK TISDHGNHEK CSSHHELQGD 60 61 IFYAQAKKTD DTDLKCLYLF ASVDAYSMAT LLSPNALTLR SFRGYARSLI KLGDQLRINK 120 121 FYEKAVSKAK LGMSITSPQG KSTDGGYFTK IKTELQNWID LATTKMQATV AVSDIGTMDN 180 181 QKEPGEEDTS FDRLKKIWVK LDDKTKINFL VVDFEKLIGY IQDKHGTEVK EHFQKCIPIA 240 241 NNLRWRCWKC HICSQVNYCF TDCKMHILDN HVHNSEPDFS ARPKCVDEIL ADMICCGDWK 300 301 PVDTAEAENL IKDRAKRGEE FVYVN |
Detection Method: | |
Confidence: | 1.31 |
Match: | 2c2lA |
Description: | Crystal structure of the CHIP U-box E3 ubiquitin ligase |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.0159092335062434 | bayes_pls_golite062009 |
Region A: Residues: [326-607] |
1 11 21 31 41 51 | | | | | | 1 GWCSDWPEAK DRERENVLKQ FAEVLKSSCA KENCTLSCTL WDWLRDYTEE NLELPGVPGI 60 61 YLDQCCFFKN PQCICFLDLK HLEHILKYFR QLTTDVRASL VPKVVNQFWE NSQVKERIDL 120 121 EGVATYNLLL DKRLLYEEEL ESDKIGTVEH YKSTGIFEDV MPKGDKIVSW ILDCPEIDRE 180 181 FVSQMANGVH NSKLWLAALR IVRCVIRKKE SYYDKRRKML TYEKMLGEAE TICDREDTRK 240 241 NVNQRSTYES ALRMKCEDLV GKQDDDTKCF LSVVRDVFER QS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [608-718] |
1 11 21 31 41 51 | | | | | | 1 SPSFEVFEDK KCISELSSTV PNDDVKKSLL TLRKSLKEKF PLIDSKILQN KSTYEKLIDV 60 61 FPKLSAVEYR LVVLPFVKKF LQDKLKKMMK TNSSSVAAGD SAERKPKKRH L |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.