| Protein: | gi|15226250, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 718 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15226250, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
1025.0 | [0..10] | [715..4] |
|
Region A: Residues: [1-325] |
1 11 21 31 41 51
| | | | | |
1 MMMKSTDESE TKWKIDDAAE LARDFWLERD GISALKLTEK TISDHGNHEK CSSHHELQGD 60
61 IFYAQAKKTD DTDLKCLYLF ASVDAYSMAT LLSPNALTLR SFRGYARSLI KLGDQLRINK 120
121 FYEKAVSKAK LGMSITSPQG KSTDGGYFTK IKTELQNWID LATTKMQATV AVSDIGTMDN 180
181 QKEPGEEDTS FDRLKKIWVK LDDKTKINFL VVDFEKLIGY IQDKHGTEVK EHFQKCIPIA 240
241 NNLRWRCWKC HICSQVNYCF TDCKMHILDN HVHNSEPDFS ARPKCVDEIL ADMICCGDWK 300
301 PVDTAEAENL IKDRAKRGEE FVYVN
|
| Detection Method: |  |
| Confidence: | 1.31 |
| Match: | 2c2lA |
| Description: | Crystal structure of the CHIP U-box E3 ubiquitin ligase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0159092335062434 | bayes_pls_golite062009 |
|
Region A: Residues: [326-607] |
1 11 21 31 41 51
| | | | | |
1 GWCSDWPEAK DRERENVLKQ FAEVLKSSCA KENCTLSCTL WDWLRDYTEE NLELPGVPGI 60
61 YLDQCCFFKN PQCICFLDLK HLEHILKYFR QLTTDVRASL VPKVVNQFWE NSQVKERIDL 120
121 EGVATYNLLL DKRLLYEEEL ESDKIGTVEH YKSTGIFEDV MPKGDKIVSW ILDCPEIDRE 180
181 FVSQMANGVH NSKLWLAALR IVRCVIRKKE SYYDKRRKML TYEKMLGEAE TICDREDTRK 240
241 NVNQRSTYES ALRMKCEDLV GKQDDDTKCF LSVVRDVFER QS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [608-718] |
1 11 21 31 41 51
| | | | | |
1 SPSFEVFEDK KCISELSSTV PNDDVKKSLL TLRKSLKEKF PLIDSKILQN KSTYEKLIDV 60
61 FPKLSAVEYR LVVLPFVKKF LQDKLKKMMK TNSSSVAAGD SAERKPKKRH L
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
