| Protein: | AGD2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 776 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGD2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
411.0 | [0..4] | [764..3] |
|
Region A: Residues: [1-431] |
1 11 21 31 41 51
| | | | | |
1 MAGFINLEDS PMFQKQVFSL EGTSDELKDR CQKLYKGVKK FMGALGEAST GVSAFADSLE 60
61 EFGAGHDDPV SVSIGGPVIS KFINTLRELS SYKEFLRSQV EHVLLERLTN FMTVDLQEAK 120
121 ESRRRFDKAV HSYDQAREKF VSLKKNTRGD IVAELEEDLE NSKSAFEKSR FNLVNSLMTI 180
181 EAKKKYEFLE SISAIMDSHF KYFKLGYDLL SQLEPYIHQV LTYAQQSKEQ SKIEQDRFAQ 240
241 RIQEFRTQSE LDSQQASAKA DPSDVGGNHV YRAIPRKNVE ANSVSTADKE VTKQGYLLKR 300
301 SASLRADWKR RFFVLDNHGS LYYYRNTGNK SAKSQHYYSG LGEHSSGVFG RFRTRHNRSA 360
361 SQGSLDCNMI DLRTSLIKLD AEDTDLRLCF RIISPQKTYT LQAENGADRM DWVNKITAAI 420
421 TIRLNSHFLQ Q
|
| Detection Method: |  |
| Confidence: | 50.69897 |
| Match: | 2elbA |
| Description: | No description for 2elbA was found. |
| Term | Confidence | Notes |
| cytoskeletal protein binding | 3.03613378654125 | bayes_pls_golite062009 |
| actin binding | 3.00914116198279 | bayes_pls_golite062009 |
| binding | 2.50303824442522 | bayes_pls_golite062009 |
| GTPase binding | 2.4109827282693 | bayes_pls_golite062009 |
| small GTPase binding | 2.35000142917744 | bayes_pls_golite062009 |
| protein binding | 2.1446140694885 | bayes_pls_golite062009 |
| actin filament binding | 1.90278181549871 | bayes_pls_golite062009 |
| SH3 domain binding | 1.01300075742025 | bayes_pls_golite062009 |
| profilin binding | 0.71636159822267 | bayes_pls_golite062009 |
| phospholipid binding | 0.289747621686826 | bayes_pls_golite062009 |
| transporter activity | 0.0356867444078989 | bayes_pls_golite062009 |
| phosphoinositide binding | 0.00504532763036469 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.00375566629887814 | bayes_pls_golite062009 |
|
Region A: Residues: [432-776] |
1 11 21 31 41 51
| | | | | |
1 SPARYLDKKN TSSGPATENL TLNQKEDYNQ RLNVGDDVLT ILREIPGNNT CAECNAPDPD 60
61 WASLNLGVLM CIECSGVHRN LGVHISKVRS LTLDVKVWEP TILDLFRNLG NGYCNSVWEE 120
121 LLHHLDDDSE KGSTDTLASV SKPSSEDWFT LKEKYINGKY LEKALVVKDE REANSTASSR 180
181 IWEAVQSRNI RDIYRLIVKA DANIINTKFD DITDLDVYHH HHVDAPDEVK KRHDPNACQR 240
241 IKNSNEARNC LQGCSLLHVA CQSGDPILLE LLLQFGADIN MRDYHGRTPL HHCIASGNNA 300
301 FAKVLLRRGA RPSIEDGGGL SVLERAMEMG AITDEELFLL LAECQ
|
| Detection Method: | |
| Confidence: | 57.522879 |
| Match: | 1n11A |
| Description: | Ankyrin-R |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 2.85681263546298 | bayes_pls_golite062009 |
| binding | 1.82139512362868 | bayes_pls_golite062009 |
| protein binding | 1.6716587413544 | bayes_pls_golite062009 |
| actin binding | 1.39613805702117 | bayes_pls_golite062009 |
| actin filament binding | 0.779030113223383 | bayes_pls_golite062009 |
