| Protein: | gi|9758171, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 1332 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9758171, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
885.0 | [0..582] | [1168..61] |
|
Region A: Residues: [1-149] |
1 11 21 31 41 51
| | | | | |
1 MTFVDDDEEE DFSVPQSASN YYFEDDDKEP VSFARLPIQW SVEEKVDGSG LGFYLRGRSD 60
61 NGLLPLHKLV KAWRYDLSNF QPEISVLTKD NIWIKLEEPR KSYGELIRTV LVTLHSIQFL 120
121 RRNPQASEKA LWEKLTRSLR SYDVKPSQN
|
| Detection Method: |  |
| Confidence: | 11.69897 |
| Match: | 2jrzA |
| Description: | No description for 2jrzA was found. |
|
Region A: Residues: [150-485] |
1 11 21 31 41 51
| | | | | |
1 DLVDHIGLIA EAAKRDRNLA NSKFILAFLT KKPTKRRLPD EDNAKDDFIV GDEDTYVASD 60
61 EDELDDEDDD FFESVCAICD NGGEILCCEG SCLRSFHATK KDGEDSLCDS LGFNKMQVEA 120
121 IQKYFCPNCE HKIHQCFICK NLGSSDNSSG AAEVFQCVSA TCGYFYHPHC VTRRLRLGNK 180
181 EESEALERQI IAGEYTCPLH KCSVCENGEV KTDSNLQFAV CRRCPKSYHR KCLPREISFE 240
241 DIEDEDILTR AWDGLLHNRV LIYCQEHEID EELLTPVRDH VKFPFTEEQK VFVKEQRRIL 300
301 ESHVGRDKAR LKVKDPALQD TCGKASKNSF RSSFPS
|
| Detection Method: | |
| Confidence: | 18.39794 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.286076792172079 | bayes_pls_golite062009 |
| protein binding | 0.14494900666454 | bayes_pls_golite062009 |
|
Region A: Residues: [486-991] |
1 11 21 31 41 51
| | | | | |
1 SKDGFSTKKH GLVSSVPDHS RKRKDIDPSI KHKMVPQKSQ KMMEDSREAG KNKLGVKEAR 60
61 DAGKSKISLG ERLFSYTQEP NPVKPGRVIP VDSKHNKTDS IASKEPGSEI PTLDNDSQRR 120
121 LLAVMKKATE EITMGTILKK FKIQSTMSTH STRNVVDKTI TMGKVEGSVQ AIRTALKKLE 180
181 EGGNIEDAKA VCEPEVLSQI LKWKDKLKVY LAPFLHGARY TSFGRHFTNP EKLQQIVDRL 240
241 HWYADDGDMI VDFCCGSNDF SCLMNAKLEE TGKKCLYKNY DLFPAKNNFN FERKDWMTVS 300
301 KDELEPGSKL IMGLNPPFGV NASLANKFIT KALEFRPKIL ILIVPPETER FQFPSISSAP 360
361 LYHSITLIYR LLSLSLVKSI TFLNRLDKKK SSYVLIWEDK TFLSGNSFYL PGSVNEEDKQ 420
421 LEDWNLVPPP LSLWSRSDFA AKHKKIAEKH CHLSRDVGSS KLKIVEEEAN ASLHPLGASD 480
481 GMCDDIPMEK DELEVAECVN KILVSE
|
| Detection Method: | |
| Confidence: | 2.23 |
| Match: | 2okcA |
| Description: | No description for 2okcA was found. |
| Term | Confidence | Notes |
| catalytic activity | 0.639646908254091 | bayes_pls_golite062009 |
| transferase activity | 0.394707018913607 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.0810339077201343 | bayes_pls_golite062009 |
| methyltransferase activity | 0.0737551340470768 | bayes_pls_golite062009 |
|
Region A: Residues: [992-1170] |
1 11 21 31 41 51
| | | | | |
1 KIDTVETVAR VHQSDHLSRR SQLKKEGKTK DYSGRKLGKS MDSNNVDWKS NDMEEDQGEL 60
61 SRAPESIKVK IPEMTSDWQS PVRSSPDDIY AVCTSISTTT PQRSHEAVEA SLPAITRTKS 120
121 NLGKNIREHG CKVQGTGKPE VSRDRPSSVR TSREDIYTVR PSPENTGQKP FEAFEPSYG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1171-1332] |
1 11 21 31 41 51
| | | | | |
1 ASLSHFDDGL AAKYGGFGGG YRMPDPPFLP DQFPLRNGPN EMFDFRGYSD LDRGIGQREY 60
61 PQQYGGHLDP MLAPPPPPNL MDNAFPLQQR YAPHFDQMNY QRMSSFPPQP PLQPSGHNLL 120
121 NPHDFPLPPP PPSDFEMSPR GFAPGPNPNY PYMSRSGGWI ND
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
