YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|50947355, gi|...

General Information:
Name(s) found: gi|50947355 [NCBI NR]
gi|42407765 [NCBI NR]
gi|215740510 [NCBI NR]
gi|115477142 [NCBI NR]
gi|113624136 [NCBI NR]
Description(s) found:
Found 8 descriptions.
SHOW ALL
  • gi|50947355|ref|XP_483205.1| unknown protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|42407765|dbj|BAD08911.1| unknown protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215740510|dbj|BAG97166.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115477142|ref|NP_001062167.1| Os08g0502000 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113624136|dbj|BAF24081.1| Os08g0502000 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 694 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKVVKIRL LEDCPPAPLS SDKKSFGTVN RFSSSDVITK KRKVLVSGGT KHCALSAVAR  60
   61 EKTSVPSFIP LSSFPVIDKS TERRIHEFAQ KVSSDITIED IQKKLVVPST HTPVSKNTDK 120
  121 ITLGMVQRSV EAINAALHML ENGASIEDVK SVCAPSDLFQ LARWKNKLNI YLAPFLHGMR 180
  181 YTSYGRHFTK LDKLEQIVDR LQWYIESGDT VVDFCCGSND FSLLLKEKLE ASEKSCFYKN 240
  241 FDLIQPKNDF NFERRDWMTV QPDELPTGCR LIMGLNPPFG FKASLANQFI NKALTFKPKL 300
  301 IILIVPKETE RLDRKYPPYE LIWEDSHQLA GKSFYLPGSL DADNKIMEQW NMSPPPLSLW 360
  361 SRSDWARKHK EIAKTMGHIS KNVWCLDDTQ RSVVNTGHAQ MANEGDDDLD NKERQEEAPL 420
  421 NASVIDQLLS DTYHDPTSSP GDYWTDTNGR SRQPCNYEGR NDPTHEYHAG MGCGSDMSIS 480
  481 SSDKSDCEKQ TETMSNSEHG HTGSEAHDHV GSAPVEQPTG FADCDEVTSA GIEYHSLENS 540
  541 PLTERPADAA GVQYKMLEDT PPPLDELVPG FSGQPIVSLP GGGRLSAGLQ YQRLEDTLSR 600
  601 GTPEAGAGCR QLEDSLPAPP AASEVDAVVA KYLPQTTSDL PALPFVPAPR IPFPGLQFAP 660
  661 RNDLWQGWYP PPEFLSRGMD HPPFMHGSSG WLDD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] MSA 1.240986 View MSA. No confident structure predictions are available.
    2 View Details [124..180] PSI-BLAST 6.69897 Crystal structure of (16411011) from Listeria monocytogenes LI2 at 2.20 A resolution
    3 View Details [181..438] PSI-BLAST 13.221849 No description for 2h1rA was found.
    4 View Details [439..694] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle