| Protein: | TRPA2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 312 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRPA2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
302.0 | [0..1] | [312..1] |
|
Region A: Residues: [1-312] |
1 11 21 31 41 51
| | | | | |
1 MAIAFKSGVF FLQSPKSQIG FRHSSPPDSS LSFKRFTPMA SLSTSSPTLG LADTFTQLKK 60
61 QGKVAFIPYI TAGDPDLSTT AEALKVLDAC GSDIIELGVP YSDPLADGPV IQAAATRSLE 120
121 RGTNLDSILE MLDKVVPQIS CPISLFTYYN PILKRGLGKF MSSIRAVGVQ GLVVPDVPLE 180
181 ETEMLRKEAL NNDIELVLLT TPTTPTERMK LIVDASEGFI YLVSSIGVTG ARSSVSGKVQ 240
241 SLLKDIKEAT DKPVAVGFGI SKPEHVKQIA GWGADGVIVG SAMVKLLGDA KSPTEGLKEL 300
301 EKLTKSLKSA LL
|
| Detection Method: |  |
| Confidence: | 60.69897 |
| Match: | 1rd5A |
| Description: | Crystal structure of Tryptophan synthase alpha chain homolog BX1: a member of the chemical plant defense system |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| tryptophan synthase activity | 3.15663465352598 | bayes_pls_golite062009 |
| indole-3-glycerol-phosphate synthase activity | 3.12120866545322 | bayes_pls_golite062009 |
| catalytic activity | 2.81275055404078 | bayes_pls_golite062009 |
| phosphoribosylanthranilate isomerase activity | 2.655130814615 | bayes_pls_golite062009 |
| carbon-carbon lyase activity | 2.44001937916931 | bayes_pls_golite062009 |
| carboxy-lyase activity | 1.80978905789979 | bayes_pls_golite062009 |
| lyase activity | 0.9228652996943 | bayes_pls_golite062009 |
| imidazoleglycerol-phosphate synthase activity | 0.82314869965119 | bayes_pls_golite062009 |
| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.302746738903759 | bayes_pls_golite062009 |
| isomerase activity | 0.14149405165663 | bayes_pls_golite062009 |
