| Protein: | VAR3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 758 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VAR3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
845.0 | [0..1] | [758..1] |
|
|
320.0 | [0..89] | [630..74] |
|
|
315.0 | [0..89] | [678..125] |
|
|
313.0 | [0..168] | [594..1455] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MNNSTRLISL FSPHPPPLFL LRGLYISRIA NLRRFHRRAF PPSSVASTNL CSFRPLVSLP 60
61 PLIPTFPIGR FYNHQVRVSA ADFVPSY
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [88-254] |
1 11 21 31 41 51
| | | | | |
1 HNQQLPEWTE LLQSLSKAGY FSDSGSISGL ESEFFPGFPD ELLRPALACL ALARERPELL 60
61 EMLSRRDVEV LVENGKPFLF KTGPDSLKRM SLYLRSGLQG IGKLMDMEKA STVDLMRLIL 120
121 SYVVDVASSE ESKQHNKEIM ESSVRSLLSQ IAKMSLRPPE SNVHDTM
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [255-399] |
1 11 21 31 41 51
| | | | | |
1 QNQYSDRDGQ GVRSFQNNVE MKRGDWICSR CSGMNFARNV KCFQCDEARP KRQLTGSEWE 60
61 CPQCDFYNYG RNVACLRCDC KRPRDSSLNS ANSDYSSDPE LERRLVENEK KAQRWLSKVA 120
121 QGGSDANSVD TDEDFPEIMP LRKGV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [400-463] |
1 11 21 31 41 51
| | | | | |
1 NRYVVSTRKP PLERRLANTE NRVATDGNSK RSDDNALGSK TTRSLNEILG SSSSLTSRSD 60
61 DKNV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [464-675] |
1 11 21 31 41 51
| | | | | |
1 SSRRFESSQG INTDFVPFVP LPSDMFAKKP KEETQIGLID NIQVDGFSGG NQNVYQEDKS 60
61 DANHSGKETD RLEKEDHKSE EPARWFKRVT ELHNVSDLES AIPQEISPEK MPMRKGENRF 120
121 VVSRKKDRSL TSPAYKRPED SDFVPFVPFP PDYFAKEKQP KESIDTLPAP ATENVSQVVQ 180
181 QEPREPSINK SDTVAVKIRN GKSLEGSLVK ES
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [676-758] |
1 11 21 31 41 51
| | | | | |
1 DLLDMSEEAK AERWFKRVAE IKNISELSEI PDEDFPSIMP MRKGVNRFVV SKRKTPLERR 60
61 LTSQRHQRNP HITNSDPTGK GDK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
