| Protein: | gi|2583120, gi|2... |
| Organism: | Arabidopsis thaliana |
| Length: | 691 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2583120, gi|2....
| Description | E-value | Query Range |
Subject Range |
|
|
370.0 | [0..3] | [688..452] |
|
Region A: Residues: [1-331] |
1 11 21 31 41 51
| | | | | |
1 MVSPLTLFLI LFFFFLSSAL SSSSSELDIL LDIKSSLDPE KRFLTSWTPD ADPCSSGSFD 60
61 GVACDGNRRV ANISLQGMGL TGTIPPSIGL LTSLTGLYLH FNSLTGHIPK DISNLPLLTD 120
121 LYLNVNNLSG EIPPLIGNLD NLQVIQLCYN KLSGSIPTQF GSLKKITVLA LQYNQLSGAI 180
181 PASLGDIDTL TRLDLSFNNL FGPVPVKLAG APLLEVLDIR NNSFSGFVPS ALKRLNNGFQ 240
241 YSNNHGLCGD GFTDLKACTG LNGPNPNRPD PTNPTNFTTV DVKPESADLQ RSNCSNNNGG 300
301 CSSKSLKSSP LGIVMGLIGS ILAVAIFGGS T
|
| Detection Method: |  |
| Confidence: | 14.0 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor activity | 3.26307298864411 | bayes_pls_golite062009 |
| transmembrane receptor activity | 3.15814977487775 | bayes_pls_golite062009 |
| molecular transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| signal transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 2.38174370875276 | bayes_pls_golite062009 |
| binding | 1.87302803330255 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 1.50579173120225 | bayes_pls_golite062009 |
| protein kinase activity | 1.43632437878638 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 1.36671598599873 | bayes_pls_golite062009 |
| kinase activity | 1.28067810202729 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.12585418084562 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.05564877695171 | bayes_pls_golite062009 |
| protein binding | 0.646159692466759 | bayes_pls_golite062009 |
| receptor binding | 0.596307412859703 | bayes_pls_golite062009 |
| transferase activity | 0.435331931559158 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 0.430075899423884 | bayes_pls_golite062009 |
| protein-hormone receptor activity | 0.42902267001067 | bayes_pls_golite062009 |
| nucleic acid binding | 0.370391722473665 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.231213253402712 | bayes_pls_golite062009 |
| growth factor binding | 0.0358215683345522 | bayes_pls_golite062009 |
|
Region A: Residues: [332-391] |
1 11 21 31 41 51
| | | | | |
1 FTWYRRRKQK IGSSLDAMDG RISTEYNFKE VSRRKSSSPL ISLEYASGWD PLGRGQSSNN 60
61
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [392-691] |
1 11 21 31 41 51
| | | | | |
1 NSALSQEVFE SFMFNLEEIE RATQSFSEIN LLGKSNVSSV YKGILRDGSV AAIKCIAKSS 60
61 CKSDESEFLK GLKMLTLLKH ENLARLRGFC CSKGRGECFL IYEFVPNGNL LQYLDVKDET 120
121 GEVLEWATRV SIINGIARGI VYLHGENGNK PAIVHQNLSA EKILIDHWYN PSLADSGLHK 180
181 LFTDDIVFSK LKASAAMGYL APEYITTGRF TDKSDVYAFG MILLQILSGK SKISHLMILQ 240
241 AVESGRLNED FMDPNLRKNF PEVEAAQLAR LGLLCTHESS NQRPSMEDVI QELNNLAADY 300
301
|
| Detection Method: | |
| Confidence: | 63.221849 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
