| Protein: | gi|25407963, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 756 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25407963, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
308.0 | [0..48] | [749..6] |
|
Region A: Residues: [1-406] |
1 11 21 31 41 51
| | | | | |
1 MNEEHCIVSQ NHSISMSLAT TMIVLFLQII TCFLFTTTVS SPHGFTIDLI QRRSNSSSFR 60
61 LSKNQLQGAS PYADTLFDYN IYLMKLQVGT PPFEIAAEID TGSDLIWTQC MPCPDCYSQF 120
121 DPIFDPSKSS TFNEQRCHGK SCHYEIIYED NTYSKGILAT ETVTIHSTSG EPFVMAETTI 180
181 GCGLHNTDLD NSGFASSSSG IVGLNMGPRS LISQMDLPYP GLISYCFSGQ GTSKINFGTN 240
241 AIVAGDGTVA ADMFIKKDNP FYYLNLDAVS VEDNRIETLG TPFHAEDGNI VIDSGSTVTY 300
301 FPVSYCNLVR KAVEQVVTAV RVPDPSGNDM LCYFSETIDI FPVITMHFSG GADLVLDKYN 360
361 MYMESNSGGL FCLAIICNSP TQEAIFGNRA QNNFLVGYDS SSLLLQ
|
| Detection Method: |  |
| Confidence: | 56.522879 |
| Match: | 1smrA |
| Description: | Chymosin (renin) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.01508543827677 | bayes_pls_golite062009 |
| hydrolase activity | 0.77554493777157 | bayes_pls_golite062009 |
| peptidase activity | 0.68518523369811 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.43925265235199 | bayes_pls_golite062009 |
| endopeptidase activity | 0.43264884039584 | bayes_pls_golite062009 |
| aspartic-type endopeptidase activity | 0.30585066730542 | bayes_pls_golite062009 |
| aspartic-type peptidase activity | 0.30585066730542 | bayes_pls_golite062009 |
|
Region A: Residues: [407-756] |
1 11 21 31 41 51
| | | | | |
1 GASPYADTLY DYSIYLMKLQ VGTPPFEIVA EIDTGSDIIW TQCMPCPNCY SQFAPIFDPS 60
61 KSSTFREQRC NGNSCHYEII YADKTYSKGI LATETVTIPS TSGEPFVMAE TKIGCGLDNT 120
121 NLQYSGFASS SSGIVGLNMG PLSLISQMDL PYPGLISYCF SGQGTSKINF GTNAIVAGDG 180
181 TVAADMFIKK DNPFYYLNLD AVSVEDNLIA TLGTPFHAED GNIFIDSGTT LTYFPMSYCN 240
241 LVREAVEQVV TAVKVPDMGS DNLLCYYSDT IDIFPVITMH FSGGADLVLD KYNMYLETIT 300
301 GGIFCLAIGC NDPSMPAVFG NRAQNNFLVG YDPSSNVISF SPTNCSALWS
|
| Detection Method: | |
| Confidence: | 72.221849 |
| Match: | 2psgA |
| Description: | REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.01508543827677 | bayes_pls_golite062009 |
| hydrolase activity | 0.77554493777157 | bayes_pls_golite062009 |
| peptidase activity | 0.68518523369811 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.43925265235199 | bayes_pls_golite062009 |
| endopeptidase activity | 0.43264884039584 | bayes_pls_golite062009 |
| aspartic-type endopeptidase activity | 0.30585066730542 | bayes_pls_golite062009 |
| aspartic-type peptidase activity | 0.30585066730542 | bayes_pls_golite062009 |
