| Protein: | PP175_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 738 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PP175_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
736.0 | [0..1] | [738..128] |
|
|
699.0 | [0..1] | [738..105] |
|
|
682.0 | [0..1] | [738..213] |
|
|
673.0 | [0..1] | [738..74] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MAIFSTAQPL SLPRHPNFSN PNQPTTNNER SRHISLIERC VSLRQLKQTH GHMIRTGTFS 60
61 DPYSASKLFA MAALSSFASL EYARKVFDEI P
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.794 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.783 | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.693 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.648 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.644 | d.298.1 | Description not found. |
| View | Download | 0.611 | a.3.1 | Cytochrome c |
| View | Download | 0.611 | a.3.1 | Cytochrome c |
| View | Download | 0.610 | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.606 | a.118.11 | Cytochrome c oxidase subunit E |
|
Region A: Residues: [92-595] |
1 11 21 31 41 51
| | | | | |
1 KPNSFAWNTL IRAYASGPDP VLSIWAFLDM VSESQCYPNK YTFPFLIKAA AEVSSLSLGQ 60
61 SLHGMAVKSA VGSDVFVANS LIHCYFSCGD LDSACKVFTT IKEKDVVSWN SMINGFVQKG 120
121 SPDKALELFK KMESEDVKAS HVTMVGVLSA CAKIRNLEFG RQVCSYIEEN RVNVNLTLAN 180
181 AMLDMYTKCG SIEDAKRLFD AMEEKDNVTW TTMLDGYAIS EDYEAAREVL NSMPQKDIVA 240
241 WNALISAYEQ NGKPNEALIV FHELQLQKNM KLNQITLVST LSACAQVGAL ELGRWIHSYI 300
301 KKHGIRMNFH VTSALIHMYS KCGDLEKSRE VFNSVEKRDV FVWSAMIGGL AMHGCGNEAV 360
361 DMFYKMQEAN VKPNGVTFTN VFCACSHTGL VDEAESLFHQ MESNYGIVPE EKHYACIVDV 420
421 LGRSGYLEKA VKFIEAMPIP PSTSVWGALL GACKIHANLN LAEMACTRLL ELEPRNDGAH 480
481 VLLSNIYAKL GKWENVSELR KHMR
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1xi4A |
| Description: | Clathrin D6 Coat |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [596-738] |
1 11 21 31 41 51
| | | | | |
1 VTGLKKEPGC SSIEIDGMIH EFLSGDNAHP MSEKVYGKLH EVMEKLKSNG YEPEISQVLQ 60
61 IIEEEEMKEQ SLNLHSEKLA ICYGLISTEA PKVIRVIKNL RVCGDCHSVA KLISQLYDRE 120
121 IIVRDRYRFH HFRNGQCSCN DFW
|
| Detection Method: | |
| Confidence: | 7.30103 |
| Match: | 2j9qA |
| Description: | No description for 2j9qA was found. |
