YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|54695178

General Information:
Name(s) found: gi|54695178 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|54695178|dbj|BAD67154.1| PPR868-14 [Physcomitrella patens] [NCBI NR]
    • Organism: Physcomitrella patens
    Length: 868 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSIVYNDGF ASTGKELDGP TSVSGGEVWR LCKAGRLREA IQLLGIIKQR GLLVNSNTYG  60
   61 CVIEHCAKAR RFEDGKMVHK QLDELGVEID IYLGNSLINF YSKFEDVASA EQVFRRMTLR 120
  121 DVVTWSSMIA AYAGNNHPAK AFDTFERMTD ANIEPNRITF LSILKACNNY SILEKGRKIH 180
  181 TIVKAMGMET DVAVATALIT MYSKCGEISV ACEVFHKMTE RNVVSWTAII QANAQHRKLN 240
  241 EAFELYEQML QAGISPNAVT FVSLLNSCNT PEALNRGRRI HSHISERGLE TDMIVANALI 300
  301 TMYCKCNSVQ EAREIFDRMS KRDVISWSAM IAGYAQSGYK DKESIDEVFQ LLERMRREGV 360
  361 FPNKVTFMSI LRACTAHGAL EQGRQIHAEL SKVGFELDRS LQTAIFNMYA KCGSIYEAEQ 420
  421 VFSKMANKNV VAWTSFLSMY IKCGDLSSAE KVFSEMPTRN VVSWNLMIAG YAQNGDIVKV 480
  481 FELLSSMKAE GFQPDRVTVI TILEACGALA GLERGKLVHA EAVKLGLESD TVVATSLIGM 540
  541 YSKCGQVAEA RTVFDKMSNR DTVAWNAMLA GYGQHGDGLE AVDLFKRMLK ERVSPNEITL 600
  601 TAVISACSRA GLVQEGREIF RMMQEDFKMT PRKQHYGCMV DLLGRAGRLQ EAEEFIQSMP 660
  661 CEPDISVWHA LLGACKSHNN VQLAERAAHH ILELEPSYAS VYITLSNIYA QAGRWDDSTK 720
  721 VRRVMDDRGL KKDRGESSIE IDGRIHTFVA EDCAHPEIDA IHAELETLTK EMKEAGYTPD 780
  781 MRFVLHDVDD VQKEKALCHH SEKLAIAYGL LKTPSGTPIR IMKNLRVCGD CHTATKFISK 840
  841 IRKREIVARD ANRFHYFNNG TCSCGDFW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..868] PSI-BLAST 23.522879 Clathrin D6 Coat


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle