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Protein Overview: PP175_ARATH

General Information:
Name(s) found: PP175_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 738 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: chloroplast RNA processing [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIFSTAQPL SLPRHPNFSN PNQPTTNNER SRHISLIERC VSLRQLKQTH GHMIRTGTFS  60
   61 DPYSASKLFA MAALSSFASL EYARKVFDEI PKPNSFAWNT LIRAYASGPD PVLSIWAFLD 120
  121 MVSESQCYPN KYTFPFLIKA AAEVSSLSLG QSLHGMAVKS AVGSDVFVAN SLIHCYFSCG 180
  181 DLDSACKVFT TIKEKDVVSW NSMINGFVQK GSPDKALELF KKMESEDVKA SHVTMVGVLS 240
  241 ACAKIRNLEF GRQVCSYIEE NRVNVNLTLA NAMLDMYTKC GSIEDAKRLF DAMEEKDNVT 300
  301 WTTMLDGYAI SEDYEAAREV LNSMPQKDIV AWNALISAYE QNGKPNEALI VFHELQLQKN 360
  361 MKLNQITLVS TLSACAQVGA LELGRWIHSY IKKHGIRMNF HVTSALIHMY SKCGDLEKSR 420
  421 EVFNSVEKRD VFVWSAMIGG LAMHGCGNEA VDMFYKMQEA NVKPNGVTFT NVFCACSHTG 480
  481 LVDEAESLFH QMESNYGIVP EEKHYACIVD VLGRSGYLEK AVKFIEAMPI PPSTSVWGAL 540
  541 LGACKIHANL NLAEMACTRL LELEPRNDGA HVLLSNIYAK LGKWENVSEL RKHMRVTGLK 600
  601 KEPGCSSIEI DGMIHEFLSG DNAHPMSEKV YGKLHEVMEK LKSNGYEPEI SQVLQIIEEE 660
  661 EMKEQSLNLH SEKLAICYGL ISTEAPKVIR VIKNLRVCGD CHSVAKLISQ LYDREIIVRD 720
  721 RYRFHHFRNG QCSCNDFW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..91] deduced N/A No confident structure predictions are available.
    2 View Details [92..595] PSI-BLAST 8.69897 Clathrin D6 Coat
    3 View Details [596..738] PSI-BLAST 7.30103 No description for 2j9qA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle