Protein: | SPPA1_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 677 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPPA1_ARATH.
Description | E-value | Query Range |
Subject Range |
|
473.0 | [0..1] | [677..1] |
|
420.0 | [0..1] | [675..1] |
|
418.0 | [0..79] | [644..7] |
|
414.0 | [0..84] | [632..12] |
|
414.0 | [0..84] | [632..12] |
|
411.0 | [0..90] | [660..13] |
|
410.0 | [0..90] | [660..13] |
|
410.0 | [0..90] | [660..13] |
|
410.0 | [0..90] | [660..13] |
|
409.0 | [0..90] | [660..13] |
Region A: Residues: [1-77] |
1 11 21 31 41 51 | | | | | | 1 MAKLLLLHAP HVIPRFSSSS SRSLVSAAAL YRRPLLVNPQ FSHIGPRLHS PYNRRFSARA 60 61 FDDSPASSAE MEKEKQE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [78-299] |
1 11 21 31 41 51 | | | | | | 1 QLLDGVSGKK DEDYPTGEME YENRNAWEIF VVKFRMLFAY PWQRVRKGSV LTMTLRGQIS 60 61 DQLKSRFNSG LSLPQLSENF VKAAYDPRIA GVYLHIDPLS CGWGKVEEIR RHILNFKKSG 120 121 KFIVGYISIC GLKEYYLGCA CNELFAPPSA YSFLYGLTVQ ASFLGGVFEK VGIEPQVQRI 180 181 GKYKSAGDQL SRKSISEENY EMLSVLLDNI YSNWLDGVSD AT |
Detection Method: | |
Confidence: | 3.221849 |
Match: | 1uiyA |
Description: | Crystal Structure of Enoyl-CoA Hydratase from Thermus Thermophilus HB8 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [300-352] |
1 11 21 31 41 51 | | | | | | 1 GKKREDVENF INQGVYEIEK LKEAGLIKDI RYDDEVITML KERLGVEKDK KLP |
Detection Method: | |
Confidence: | 2.12 |
Match: | 2cbyA |
Description: | Crystal structure of the ATP-dependent Clp Protease proteolytic subunit 1 (ClpP1) from Mycobacterium tuberculosis |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [353-580] |
1 11 21 31 41 51 | | | | | | 1 TVDYKKYSGV KKWTLGLTGG RDQIAIIRAG GSISRVKGPL STPGSAIIAE QLIEKIRSVR 60 61 ESKKYKAAII RIDSPGGDAL ASDLMWREIK LLAETKPVIA SMSDVAASGG YYMAMAANAI 120 121 VAENLTLTGS IGVVTARFTL AKLYEKIGFN KETISRGKYA ELLGAEERPL KPEEAELFEK 180 181 SAQHAYQLFR DKAALSRSMP VDKMEEVAQG RVWTGKDAHS RGLIDAVG |
Detection Method: | |
Confidence: | 44.69897 |
Match: | 1tyfA |
Description: | Clp protease, ClpP subunit |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [581-677] |
1 11 21 31 41 51 | | | | | | 1 GLSRAIAIAK QKANIPLNKK VTLVELSRPS TSLPDILSGI GSSVIGVDRT LKGLLDELTI 60 61 TEGVQARMDG IMFQQLGRDS LATPIIDMLK DYLSSLR |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.880 | a.152.1 | Antioxidant defence protein AhpD |