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View Structure Prediction Details

Protein: SCP14_ARATH
Organism: Arabidopsis thaliana
Length: 435 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCP14_ARATH.

Description E-value Query
Range
Subject
Range
SCP3_ARATH - Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3 PE=2 SV=1
475.0 [0..8] [435..14]

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Predicted Domain #1
Region A:
Residues: [1-435]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSWIPKLLL LQLVLLLTKH ADSSSIIKYL PGFEGPLPFE LETGYIGVGD EDEDQMFYYF  60
   61 IKSESNPEED PLLVWLSGGP GCSSFTGLVY ENGPLGFKVE AYNGSIPTLV STTYSWTKVA 120
  121 NIIYLDQPVG AGFSYSRNPF ADRPSDTGSA KLVNEFVRKW LAKHPDYFSN PFYVTGNSYS 180
  181 GKVIPAIVQE ISNGNYICCK PQINLQGYVI GNPVAYYDHD KDSRIPFAHG VALISDELFE 240
  241 SLKRSCGGSY SIVDPLNTEC LKLIKDYHKC VSGIYQELIL KPKCETTSPD CYTYRYLLSI 300
  301 YWANNEIVRR ALKVVEGSKG KWERCDLSVR SNQDIKSSIP YHMNNSIKGY RSLVISGDHD 360
  361 MTIPFLGTQA WIRSLNYSIT EKWRPWMILD QVAGYTKTYA NKMTLATVKG GGHTLEYKPE 420
  421 ENSILFKRWI SGQPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.221849
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 4.09944423676394 bayes_pls_golite062009
peptidase activity 2.49064988313037 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.10044305272656 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.3250951453762 bayes_pls_golite062009
endopeptidase activity 0.43631945855397 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.282381128231187 bayes_pls_golite062009
thiolester hydrolase activity 0.22327746138619 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.1174692258176 bayes_pls_golite062009
binding 0.112743564301567 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle