YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SCP10_ARATH
Organism: Arabidopsis thaliana
Length: 437 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCP10_ARATH.

Description E-value Query
Range
Subject
Range
SCP9_ARATH - Serine carboxypeptidase-like 9 OS=Arabidopsis thaliana GN=SCPL9 PE=2 SV=1
465.0 [0..1] [437..1]

Back

Predicted Domain #1
Region A:
Residues: [1-437]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSTLKHLLL LLLVLIRHVD SAAIVKSLPG LEGRLPFELE TGYIGIGEEE DIQLFYYFIK  60
   61 SENNPKEDPL LLWLDGGPGC SSLGGLLFEN GPVALKSAVY NGSNPSLFST TYSWTKMANI 120
  121 IYLDQPVGSG FSYSRTPIGK SSDTSEVKRI HEFLQKWLSK HPQFFSNPFY VTGDSYSGMI 180
  181 VPALVQEISK GNYICCKHLI NLQGYVLGNP ITYAEHEKNY RIPFSHGMSL ISDELYESLK 240
  241 RNCKGNYENV DPRNTKCVRL VEEYHKCTDK INTQHILIPD CDKKGHGITS PDCYYYLYFL 300
  301 IECWANNERV REALHVTKGT KGQWQRCNWT IPYDNNIISS VPYHMDNSIN GYRSLIYSGD 360
  361 HDITMPFQAT QAWIKSLNYS IVDDWRPWMI NDQIAGYTRT YSNKMTFATV KGGGHTAEYL 420
  421 PNESSIMFQR WISGQPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.69897
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 4.09944423676394 bayes_pls_golite062009
peptidase activity 2.49064988313037 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.10044305272656 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.3250951453762 bayes_pls_golite062009
endopeptidase activity 0.35106325845064 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.282381128231187 bayes_pls_golite062009
thiolester hydrolase activity 0.22327746138619 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.1174692258176 bayes_pls_golite062009
binding 0.112743564301567 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle