YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FQRL3_ARATH
Organism: Arabidopsis thaliana
Length: 207 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FQRL3_ARATH.

Description E-value Query
Range
Subject
Range
gi|21068664 - gi|21068664|emb|CAD31838.1| putative quinone oxidoreductase [Cicer arietinum]
195.0 [0..1] [205..1]

Back

Predicted Domain #1
Region A:
Residues: [1-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVTKIYIVY YSLHGHVETM AREVLRGVNS VPDVEATLWQ VPETLPEKIL EKVKAVPRPD  60
   61 DVPDIRPEQL AEADGFMFGF PSRFGVMASQ VMTFFDNTND LWTTQALAGK PAGIFWSTGF 120
  121 HGGGQELTAL TAVTKLAHHG MIFVPVGYTF GKSMYEMGEV KGGSPYGSGT YAADGSREPT 180
  181 ELEIQQANYH GKYFAGIAKK LKKRSPV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.30103
Match: 2a5lA
Description: The crystal structure of the Trp repressor binding protein WrbA from Pseudomonas aeruginosa
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transcription regulator activity 2.32880196921974 bayes_pls_golite062009
binding 1.54529414520518 bayes_pls_golite062009
oxidoreductase activity 1.2698167260481 bayes_pls_golite062009
catalytic activity 0.275631658558537 bayes_pls_golite062009
protein binding 0.191220795572558 bayes_pls_golite062009
transcription factor binding 0.0852528568191628 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle