| Protein: | gi|6729526, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 662 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6729526, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
374.0 | [0..8] | [658..141] |
|
Region A: Residues: [1-301] |
1 11 21 31 41 51
| | | | | |
1 MQFLRLLTLL VSSYFFFFIN FSSSLNPDGL SLLALKSAIL RDPTRVMTSW SESDPTPCHW 60
61 PGIICTHGRV TSLVLSGRRL SGYIPSKLGL LDSLIKLDLA RNNFSKPVPT RLFNAVNLRY 120
121 IDLSHNSISG PIPAQIQSLK NLTHIDFSSN LLNGSLPQSL TQLGSLVGTL NLSYNSFSGE 180
181 IPPSYGRFPV FVSLDLGHNN LTGKIPQIGS LLNQGPTAFA GNSELCGFPL QKLCKDEGTN 240
241 PKLVAPKPEG SQILPKKPNP SFIDKDGRKN KPITGSVTVS LISGVSIVIG AVSISVWLIR 300
301 R
|
| Detection Method: |  |
| Confidence: | 16.69897 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor activity | 3.26307298864411 | bayes_pls_golite062009 |
| transmembrane receptor activity | 3.15814977487775 | bayes_pls_golite062009 |
| molecular transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| signal transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 2.38174370875276 | bayes_pls_golite062009 |
| binding | 1.87302803330255 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 1.50579173120225 | bayes_pls_golite062009 |
| protein kinase activity | 1.43632437878638 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 1.36671598599873 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.16530645523007 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.12585418084562 | bayes_pls_golite062009 |
| kinase activity | 1.11577341189523 | bayes_pls_golite062009 |
| protein binding | 0.646159692466759 | bayes_pls_golite062009 |
| receptor binding | 0.596307412859703 | bayes_pls_golite062009 |
| transferase activity | 0.435331931559158 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 0.430075899423884 | bayes_pls_golite062009 |
| protein-hormone receptor activity | 0.42902267001067 | bayes_pls_golite062009 |
| nucleic acid binding | 0.370391722473665 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.231213253402712 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.154501444195573 | bayes_pls_golite062009 |
| growth factor binding | 0.0358215683345522 | bayes_pls_golite062009 |
|
Region A: Residues: [302-662] |
1 11 21 31 41 51
| | | | | |
1 KLSSTVSTPE KNNTAAPLDD AADEEEKEGK FVVMDEGFEL ELEDLLRASA YVVGKSRSGI 60
61 VYRVVAGMGS GTVAATFTSS TVVAVRRLSD GDATWRRKDF ENEVEAISRV QHPNIVRLRA 120
121 YYYAEDERLL ITDYIRNGSL YSALHGGPSN TLPSLSWPER LLIAQGTARG LMYIHEYSPR 180
181 KYVHGNLKST KILLDDELLP RISGFGLTRL VSGYSKLIGS LSATRQSLDQ TYLTSATTVT 240
241 RITAPTVAYL APEARASSGC KLSQKCDVYS FGVVLMELLT GRLPNASSKN NGEELVRVVR 300
301 NWVKEEKPLS EILDPEILNK GHADKQVIAA IHVALNCTEM DPEVRPRMRS VSESLGRIKS 360
361 D
|
| Detection Method: | |
| Confidence: | 64.0 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
