| Protein: | GNL1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1443 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GNL1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1372.0 | [0..1] | [1442..1] |
|
Region A: Residues: [1-551] |
1 11 21 31 41 51
| | | | | |
1 MGYQNHPSGS NSFHGEFKRC HSKPSKGAVA SMINSEIGAV LAVMRRNVRW GVRYIADDDQ 60
61 LEHSLIHSLK ELRKQIFSWQ SNWQYVDPRL YIQPFLDVIL SDETGAPITG VALSSVYKIL 120
121 TLEVFTLETV NVGEAMHIIV DAVKSCRFEV TDPASEEVVL MKILQVLLAC VKSKASNGLS 180
181 NQDICTIVNT CLRVVHQSSS KSELLQRIAR HTMHELIRCI FSQLPFISPL ANECELHVDN 240
241 KVGTVDWDPN SGEKRVENGN IASISDTLGT DKDDPSSEMV IPETDLRNDE KKTEVSDDLN 300
301 AAANGENAMM APYGIPCMVE IFHFLCTLLN VGENGEVNSR SNPIAFDEDV PLFALGLINS 360
361 AIELGGPSFR EHPKLLTLIQ DDLFCNLMQF GMSMSPLILS TVCSIVLNLY LNLRTELKVQ 420
421 LEAFFSYVLL RIAQSKHGSS YQQQEVAMEA LVDLCRQHTF IAEVFANFDC DITCSNVFED 480
481 VSNLLSKNAF PVNGPLSAMH ILALDGLISM VQGMAERVGE ELPASDVPTH EERYEEFWTV 540
541 RCENYGDPNF W
|
| Detection Method: |  |
| Confidence: | 1.07 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.267627928716605 | bayes_pls_golite062009 |
|
Region A: Residues: [552-771] |
1 11 21 31 41 51
| | | | | |
1 VPFVRKVKHI KKKLMLGADR FNRDPNKGLQ YLQGVHLLPE KLDPKSVACF FRYTCGLDKN 60
61 VMGDFLGNHD QFCIQVLHEF AKTFDFQNMN LATALRLFVG TFKLSGEAQK IHRVLEAFSE 120
121 RYYEQSPHIL IDKDAAFVLA YSIILLNTDQ HNAQVKTRMT EEDFIRNNRT INGGADLPRE 180
181 YLSEIYHSIR HSEIQMDEDK GTGFQLMTAS RWISVIYKSK
|
| Detection Method: | |
| Confidence: | 77.0 |
| Match: | 1r8mE |
| Description: | SEC7 DOMAIN OF THE ARF EXCHANGE FACTOR ARNO WITH BREFELDIN A-SENSITIZING MUTATIONS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| enzyme regulator activity | 0.33175950121636 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.31803821430449 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.31764113391724 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 0.19174216196088 | bayes_pls_golite062009 |
|
Region A: Residues: [772-1443] |
1 11 21 31 41 51
| | | | | |
1 ETSPYIQCDA ASHLDRDMFY IVSGPTIAAT SVVFEQAEQE DVLRRCIDGL LAIAKLSAYY 60
61 HLNSVLDDLV VSLCKFTPFF APLSADEAVL VLGEDARARM ATEAVFLIAN KYGDYISAGW 120
121 KNILECVLSL NKLHILPDHI ASDAADDPEL STSNLEQEKP SANPVPVVSQ SQPSAMPRKS 180
181 SSFIGRFLLS FDSEETKPLP SEEELAAYKH ARGIVKDCHI DSIFSDSKFL QAESLQQLVN 240
241 SLIRASGKDE ASSVFCLELL IAVTLNNRDR ILLIWPTVYE HILGIVQLTL TPCTLVEKAV 300
301 FGVLKICQRL LPYKENLTDE LLKSLQLVLK LKAKVADAYC ERIAQEVVRL VKANASHVRS 360
361 RTGWRTIISL LSITARHPEA SEAGFEALRF IMSEGAHLLP SNYELCLDAA SHFAESRVGE 420
421 VDRSISAIDL MSNSVFCLAR WSQEAKNSIG ETDAMMKLSE DIGKMWLKLV KNLKKVCLDQ 480
481 RDEVRNHAIS MLQRAIAGAD GIMLPQPLWF QCFDSAVFIL LDDVLTFSIE NSRKTLKKTV 540
541 EETLVLATKL MSKAFLQSLQ DISQQPSFCR LWVGVLNRLE TYMSTEFRGK RSEKVNELIP 600
601 ELLKNTLLVM KATGVLLPGD DIGSDSFWQL TWLHVNKISP SLQSEVFPQE ELDQFQRRNA 660
661 KPEDPPVPGN EV
|
| Detection Method: | |
| Confidence: | 1.23 |
| Match: | 2ie3A |
| Description: | No description for 2ie3A was found. |
| Term | Confidence | Notes |
| binding | 0.267627928716605 | bayes_pls_golite062009 |
