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Protein Overview: GNOM_ARATH

General Information:
Name(s) found: GNOM_ARATH [Swiss-Prot]
Description(s) found:
Found 22 descriptions.
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  • ARF guanine-nucleotide exchange factor GNOM OS=Arabidopsis thaliana GN=GN PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1451 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: phloem or xylem histogenesis [IMP]
    embryonic development ending in seed dormancy [IMP]
    embryonic pattern specification [IMP]
    cellular cell wall organization [IMP]
    cytokinesis by cell plate formation [IMP]
    cell adhesion [IMP]
    root hair cell differentiation [IGI]
    regulation of vesicle targeting, to, from or within Golgi [TAS]
    longitudinal axis specification [IMP]
    unidimensional cell growth [IMP]
    establishment of planar polarity [IGI]
    lateral root primordium development [IMP]
    basipetal auxin transport [IMP]
    Molecular Function: protein homodimerization activity [IPI]
    GTP:GDP antiporter activity [IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRLKLHSGI KAIEEEPEDF ECTDSSNTTT LACMIDTEIA AVLAVMRRNV RWGGRYMSGD  60
   61 DQLEHSLIQS LKALRKQVFS WNQPWHTISP MLYLQPFLDV IRSDETGAPI TSIALSSVYK 120
  121 ILNLNVIDQN TANIEDAMHL VVDSVTSCRF EVTDPASEEV VLMKILQVLL ACMKNKASVM 180
  181 LSNQHVCTVV NTCFRVVHQA GMKGELLQRV ARHTMHELVR CIFSHLPDVE RTETTLVNRA 240
  241 GSIKQEKAGV DSDYAIVSKP VEDGNANSEY DVENSMATFA TGAQSLMDDG PVGPGSRKPA 300
  301 SPYDLHIMTE PYGVPSMVEI FHFLCSLLNV VEHVGMGSRS NTIAFDEDVP LFALNLINSA 360
  361 IELGGSSIRH HPRLLSLIQD ELFRNLMQFG LSMSPLILSM VCSIVLNLYQ HLRTELKLQL 420
  421 EAFFSCVILR LAQGKYGPSY QQQEVAMEAL VNFCRQKSFM VEMYANLDCD ITCSNVFEEL 480
  481 SNLLSKSTFP VNCPLSAMHI LALDGLIAVI QGMAERISNG LTGLDLGPVH LDEYTPFWMV 540
  541 KCDNYSDPNH WVSFVRRRKY IKRRLMIGAD HFNRDPKKGL EFLQGTHLLP DKLDPQSVAC 600
  601 FFRYTAGLDK NLVGDFLGNH DEFCVQVLNE FAGTFDFQYM NLDTALRLFL ETFRLPGESQ 660
  661 KIQRVLEAFS ERYYMQSPEI LANKDAALVL SYSIIMLNTD QHNVQVKKKM TEEDFIRNNR 720
  721 HINGGNDLPR EFLSELFHSI CNNEIRTTPE QGAGFPEMTP SRWIDLMHKS KKTAPYILAD 780
  781 SRAYLDHDMF AIMSGPTIAA ISVVFDHAEH EDVYQTCIDG FLAIAKISAC HHLEDVLDDL 840
  841 VVSLCKFTTL LNPSSVDEPV LAFGDDAKAR MATITIFTIA NKYGDYIRTG WRNILDCILR 900
  901 LHKLGLLPAR VASDAADESE HSSEQGQGKP LANSLSSAHL QSMGTPRRSS GLMGRFSQLL 960
  961 SLDTEEPRSQ PTEQQLAAHQ RTLQTIQKCH IDSIFTESKF LQAESLLQLA RALIWAAGRP1020
 1021 QKGTSSPEDE DTAVFCLELL IAITLNNRDR IVLLWQGVYE HIATIAQSTV MPCNLVDKAI1080
 1081 FGLLRICQRL LPYKESLADE LLRSLQLVLK LDARVADAYC EQIAIEVSRL VKANANHIRS1140
 1141 QAGWRTITSL LSITARHPEA SESGFDAVSF VMSEGTHLYP ANYVLCVDAA RQFAESRVGQ1200
 1201 SERSIRALDL MGDSLEFLAK WALSAKENMG EEDFGKMSQD IGEMWLRLVQ GLRKVCLDQR1260
 1261 EDVRNHALQS LQKCLGGVDG INLAHSMWSQ CFDKVIFTVL DDLLEIAAGS QKDYRNMEGT1320
 1321 LLLAIKLLSK VFLQQLQELS QLSTFCKLWL GVLTRMEKYM KVKVRGKKSD KLQESVPELL1380
 1381 KNILLVMKTK GVLLQRSALG GDSLWELTWL HVNNIAPSMR LELFPDQESS QLGDDETVSN1440
 1441 GLSSPENTTG S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..150] deduced N/A No confident structure predictions are available.
    2 View Details [151..237] MSA 1.133994 View MSA. No confident structure predictions are available.
    3 View Details [238..310] deduced N/A No confident structure predictions are available.
    4 View Details [311..526] MSA 2.197995 View MSA. No confident structure predictions are available.
    5 View Details [527..884] PSI-BLAST 72.69897 No description for 2r09A was found.
    6 View Details [885..1000] deduced N/A No confident structure predictions are available.
    7 View Details [1001..1109] MSA 2.196994 View MSA. No confident structure predictions are available.
    8 View Details [1110..1305] MSA 3.169995 View MSA. No confident structure predictions are available.
    9 View Details [1306..1451] MSA 2.151993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.43

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle