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View Structure Prediction Details

Protein: gi|7271038, gi|1...
Organism: Arabidopsis thaliana
Length: 582 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7271038, gi|1....

Description E-value Query
Range
Subject
Range
gi|2208903, gi|1... - gi|2208903|dbj|BAA20519.1| ascorbate oxidase [Arabidopsis thaliana], pir||T44928 L-ascorbate oxidase...
426.0 [0..20] [582..1]

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Predicted Domain #1
Region A:
Residues: [1-582]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRPKRSSDT VHVFNLMVLC FIALFFSSVL CQGKIRRFKW EVKYEFKSPD CFEKLVITIN  60
   61 GKFPGPTIKA QQGDTIVVEL KNSFMTENVA VHWHGIRQIG TPWFDGVEGV TQCPILPGEV 120
  121 FIYQFVVDRP GTYMYHSHYG MQRESGLIGM IQVSPPATEP EPFTYDYDRN FLLTDWYHKS 180
  181 MSEKATGLAS IPFKWVGEPQ SLMIQGRGRF NCSNNLTTPP SLVSGVCNVS NADCSRFILT 240
  241 VIPGKTYRLR IGSLTALSAL SFQIEGHNLT VVEADGHYVE PFTVKNLFVY SGETYSVLLK 300
  301 ADQNPRRNYW ITSSIVSRPA TTPPATAVLN YYPNHPRRRP PTSESSNIVP EWNDTRSRLA 360
  361 QSLAIKARRG FIHALPENSD KVIVLLNTQN EVNGYRRWSV NNVSYHHPKT PYLIALKQNL 420
  421 TNAFDWRFTA PENYDSRNYD IFAKPLNANA TTSDGIYRLR FNSTVDVILQ NANTMNANNS 480
  481 ETHPWHLHGH DFWVLGYGEG KFNESEDPKR YNRVDPIKKN TVAVQPFGWT ALRFRADNPG 540
  541 VWSFHCHIES HFFMGMGIVF ESGIDKVSSL PSSIMGCGQT KR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 115.0
Match: 1aozA
Description: Ascorbate oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrogen ion transmembrane transporter activity 6.31879033933655 bayes_pls_golite062009
laccase activity 6.27966238742406 bayes_pls_golite062009
cation transmembrane transporter activity 5.08231506697861 bayes_pls_golite062009
ion transmembrane transporter activity 4.97613096658411 bayes_pls_golite062009
copper ion binding 4.70996854616784 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 4.59563513647911 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 4.5497559272853 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 3.81325448081642 bayes_pls_golite062009
metal ion transmembrane transporter activity 3.07382952844477 bayes_pls_golite062009
oxidoreductase activity, oxidizing metal ions, oxygen as acceptor 3.06728564106245 bayes_pls_golite062009
ferroxidase activity 3.06728564106245 bayes_pls_golite062009
transition metal ion transmembrane transporter activity 2.9428517783106 bayes_pls_golite062009
transporter activity 2.75690053147562 bayes_pls_golite062009
copper ion transmembrane transporter activity 2.70015092777938 bayes_pls_golite062009
substrate-specific transporter activity 2.68353223516483 bayes_pls_golite062009
transmembrane transporter activity 2.67027550825653 bayes_pls_golite062009
oxidoreductase activity, oxidizing metal ions 2.22770810588564 bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity 1.88441243755534 bayes_pls_golite062009
oxidoreductase activity 1.49034416929059 bayes_pls_golite062009
iron ion transmembrane transporter activity 1.17954317549442 bayes_pls_golite062009
binding 1.14851914699653 bayes_pls_golite062009
receptor binding 1.13017320104601 bayes_pls_golite062009
transition metal ion binding 0.89527553956026 bayes_pls_golite062009
heme-copper terminal oxidase activity 0.379596275876029 bayes_pls_golite062009
catalytic activity 0.363071622766357 bayes_pls_golite062009
metal ion binding 0.305777337672225 bayes_pls_golite062009
cation binding 0.305777337672225 bayes_pls_golite062009
ion binding 0.300057966011705 bayes_pls_golite062009
active transmembrane transporter activity 0.269767937058687 bayes_pls_golite062009
primary active transmembrane transporter activity 0.246123492452788 bayes_pls_golite062009
cytochrome-c oxidase activity 0.222255654263847 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors, oxygen as acceptor 0.222255654263847 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors 0.222255654263847 bayes_pls_golite062009
protein binding 0.19183671060378 bayes_pls_golite062009
signal transducer activity 0.049534674746601 bayes_pls_golite062009
molecular transducer activity 0.049534674746601 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle