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View Structure Prediction Details

Protein: FRS8_ARATH
Organism: Arabidopsis thaliana
Length: 696 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRS8_ARATH.

Description E-value Query
Range
Subject
Range
gi|50919719, gi|... - gi|50919719|ref|XP_470220.1| Putative mutator-like transposase [Oryza sativa], gi|15451606|gb|AAK987...
377.0 [0..1] [671..29]
gi|17047024 - gi|17047024|gb|AAL34929.1|AC079037_2 Putative mutator-like transposase [Oryza sativa]
gi|37530568, gi|... - gi|37530568|ref|NP_919586.1| putative mutator-like transposase [Oryza sativa (japonica cultivar-grou...
363.0 [0..1] [671..123]

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Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEQLVVDDD DDDLAPPPIP DLDIDLEDDD DACCHGLLHI APNHEEETGC DENAFANEKC  60
   61 LMAPPPTPGM EFE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [74-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYDDAYSFYN SYARELGFAI RVKSSWTKRN SKEKRGAVLC CNCQGFKLLK DAHSRRKETR  60
   61 TGCQAMIRLR LIHFDRWKVD QVKLDHNHSF DPQRAH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.958607
Match: PF03101.6
Description: No description for PF03101.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [170-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSKSHKKSSS SASPATKTNP EPPPHVQVRT IKLYRTLALD TPPALGTSLS SGETSDLSLD  60
   61 HFQSSRRLEL RGGFRALQDF FFQIQLSSPN FLYLMDLADD GSLRNVFWID ARARAAYSHF 120
  121 GDVLLFDTTC LSNAYELPLV AFVGINHHGD TILLGCGLLA DQSFETYVWL FRAWLTCMLG 180
  181 R

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [351-514]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPQIFITEQC KAMRTAVSEV FPRAHHRLSL THVLHNICQS VVQLQDSDLF PMALNRVVYG  60
   61 CLKVEEFETA WEEMIIRFGM TNNETIRDMF QDRELWAPVY LKDTFLAGAL TFPLGNVAAP 120
  121 FIFSGYVHEN TSLREFLEGY ESFLDKKYTR EALCDSESLK LIPK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [515-696]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKTTHPYESQ MAKVFTMEIF RRFQDEVSAM SSCFGVTQVH SNGSASSYVV KEREGDKVRD  60
   61 FEVIYETSAA AQVRCFCVCG GFSFNGYQCR HVLLLLSHNG LQEVPPQYIL QRWRKDVKRL 120
  121 YVAEFGSGRV DIMNPDQWYE HLHRRAMQVV EQGMRSKEHC RAAWEAFREC ANKVQFVTEK 180
  181 PS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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