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Protein Overview: gi|17047024

General Information:
Name(s) found: gi|17047024 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|17047024|gb|AAL34929.1|AC079037_2 Putative mutator-like transposase [Oryza sativa] [NCBI NR]
    • Organism: Oryza sativa
    Length: 1597 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKVTFQIV HGEGNIRFGP DGVDLSDFVM TSKGIDRPAE RTFQSIYSWL LRGFRIDQEV  60
   61 YTMSVSVVVS RATEGYFWEL MPMDSTDAWR RYVEMAFERS WPLVIFVSVE EKDINVSMQT 120
  121 EDVEGPINAG DVVGPSMQNE ENQPREEQAM GMADEGERVG IIVDEMERED SDNEEVDDDA 180
  181 SSDEEGDVMA TDWANEDFSG LVISEGDHVP WEYKENEVIE GARYAHKDEM KEAVKHWAVS 240
  241 LQREFRVVKS TNYVYEVRCM KEDCPWRVHA YKGKWNDYWK VSIVTEHKCY LQGVEKYHRN 300
  301 ITSAFVASEM YSSVVGNIGF EPKSIIRHIE NKFKYTISYA KAWRAKQKII EMRYGTFEAS 360
  361 YDNLPRLLAT IAQRNNNTYY DLHTFTSVDD RTKSVLQRAF FSLGACINAF VHCRPVLCID 420
  421 GTFMTGKYRG QILTAIGCDG NNQVLPMAFA FVESENTESW YWFLERVHIA VVRMRPNVCL 480
  481 IHDRHAGMLR AIDYLQNGWD EKGLPAKWPD VRSRWCMRHM GANFYKQFKN KHLMELFKRL 540
  541 CAQNQEKKFN ELWDKLDELT TKQTDEQSRR PLVEGDEPPI PLGALHDDPP TMRRRSGSSI 600
  601 RNFTQWIENE PKEKWSLLFD TDGSRYGIMT TNLAEVYNWV MRGVRVLPLV AIVEFILHGT 660
  661 QAYFRDRYKK IGPSMADNNI VFGNVVTKYM EDKIKKARRH RVVAQGTQVH RYEIMCVDRS 720
  721 RRGIYRKQAV QECVLKADGG CTCSCMKPKL HHLPCSHVLA AAGDCGISPN VYVSNYFRKE 780
  781 AIFHTWSEEI YGFGISGSYT TLSAQVFYIP DPSKLRVKKG RRQTRRIRND MDESEAGGRT 840
  841 LRCSKCDLLG HTYKKCPKNA EVPSGANASP SGQASDGMAY DTPALLNRGI DRNHRSFLSA 900
  901 VEGAQLGTFR PRTSREWLRV DPRHVPWLRA AGLLPLCRLV EAAADDRDPA KRWDADRSLL 960
  961 AALIDRWRPE THTFHLPCGE MAPTLQDVSY LLGLPLAGAA VGPVDGVFGW KEDITARFEQ1020
 1021 VMRLPHLGPT TTLPPYSTVG PSKAWLLQFT ADLLHPDADD YSVRRSLEAY LLWLFGWVMF1080
 1081 TSTHGHAVDF RLVHYARSIA DAQPQDVPQW SWGSAVLAAT YRALCEACTK TDAGAIIAGC1140
 1141 PMLLQLWAAE RFAIGRPVVD SAPYGVGRSA QWPEDGPTMG TYWCRRGRRY AHVQVRRGYP1200
 1201 DFVFEFDRLQ PSDVIWEPYT EEAVAARAPL GLSCLCTRDQ AYWLTILPMV FDIFVEPHCP1260
 1261 QRVMRQFGLR QVFPGNVQPT VLPADHSLTR RGQLAGALWA PRVQQYVDDW VLATEEVINE1320
 1321 LFPHTEENYR DYLRWYLPRT RARVTFTPDA PEPHVAAVTD AYPTHRDRDY FVAADAARDI1380
 1381 SADITAVQVR LNRGLHLTDV EQRVTFDRMQ EKMRAVMRVF SCRSAVDVVP PAGPVQPRPR1440
 1441 APTVGAGPRP TAPISHGPRL PSSAFAGTTG ASTSSAGAFA TSSGAFASSS SHGASIPRPH1500
 1501 AGFAAGIFGT GASSSHAGRT GPTSQFYDDD LHGADHHDVL GSSQLGGAPE AHTQEQPEVT1560
 1561 PVQAGRVGRA VPPDRLTYSH GHIRAQGRRD RGKRPRQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] Pfam 36.060481 No description for PF09322.2 was found. No confident structure predictions are available.
    2 View Details [110..178] deduced N/A No confident structure predictions are available.
    3 View Details [179..290] Pfam 24.431798 No description for PF03108.7 was found. No confident structure predictions are available.
    4 View Details [291..428] deduced N/A No confident structure predictions are available.
    5 View Details [429..529] Pfam 29.677781 No description for PF10551.1 was found. No confident structure predictions are available.
    6 View Details [530..798] deduced N/A No confident structure predictions are available.
    7 View Details [799..890] deduced N/A No confident structure predictions are available.
    8 View Details [891..1133] Pfam 9.886057 No description for PF10536.1 was found. No confident structure predictions are available.
    9 View Details [1134..1597] PSI-BLAST 13.221849 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle