| Protein: | gi|20260206, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 294 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20260206, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
318.0 | [0..1] | [293..1] |
|
Region A: Residues: [1-62] |
1 11 21 31 41 51
| | | | | |
1 MQRRLVRLKK EYIYRKSLEG DERKVYEQKR LIREALQEGK PIPTELRNVE AKLRQEIDLE 60
61 DQ
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.900 | N/A | N/A | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.749 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.698 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.679 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.583 | N/A | N/A | a.2.2 | Ribosomal protein L29 (L29p) |
|
Region A: Residues: [63-183] |
1 11 21 31 41 51
| | | | | |
1 NTAVPRSHID DEYANATEAD PKILLTTSRN PSAPLIRFTK ELKFVFPNSQ RINRGSQVIS 60
61 EIIETARSHD FTDVILVHEH RGVPDGLIIS HLPFGPTAYF GLLNVVTRHD ISDKKSIGKM 120
121 P
|
| Detection Method: | |
| Confidence: | 15.154902 |
| Match: | 2cxhA |
| Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| aminoacyl-tRNA ligase activity | 3.58650371779212 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 3.58624422951947 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 3.58624422951947 | bayes_pls_golite062009 |
| ligase activity | 2.71574082295198 | bayes_pls_golite062009 |
| proline-tRNA ligase activity | 2.35871952544841 | bayes_pls_golite062009 |
| binding | 1.73857064375258 | bayes_pls_golite062009 |
| catalytic activity | 0.902495165806215 | bayes_pls_golite062009 |
| protein binding | 0.358563180490135 | bayes_pls_golite062009 |
|
Region A: Residues: [184-294] |
1 11 21 31 41 51
| | | | | |
1 EQYPHLIFNN FTTQMGQRVG NILKHIFPAP KLDAKRIVTF SNQSDYISFR NHVYDKGEGG 60
61 PKSIELKEIG PRFELRLYQV KLGTVEQNEA EIEWVIRPYM NTSKKRKFIG E
|
| Detection Method: | |
| Confidence: | 1.74 |
| Match: | 2cxhA |
| Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
| Matching Structure (courtesy of the PDB): |
|
