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Protein Overview: gi|215765881, gi...

General Information:
Name(s) found: gi|50941263 [NCBI NR]
gi|37805976 [NCBI NR]
gi|215765881 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|50941263|ref|XP_480159.1| putative U3 snoRNP protein IMP4 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|37805976|dbj|BAC99390.1| putative U3 snoRNP protein IMP4 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215765881|dbj|BAG87578.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 293 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRNTRLRR EYLYRKSLEG KERQHYEKKR RLREALDEGK PIPTELRNEE LALRREIDLE  60
   61 DKDSAVPRSL IDDEYAGAAL REPKILLTTS RNPSAPLTQF VKELKVVFPN SQRMNRGGQV 120
  121 ISEIVESCRS HDITDLVLVH EHRGQPDGLI VCHLPFGPTA YFGLLNVVTR HDIKDRKAMG 180
  181 KMSEAYPHLI LDNFTTKTGE RTANIVKHLF PVPKPDSKRI ITFANRDDYI SFRHHVYEKH 240
  241 GGPKSLDLKE VGPRFELRLY QIKRGTVDQA EAQNEFVLRP YMNTAKKQKS LGA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] MSA 2.142995 View MSA. No confident structure predictions are available.
    2 View Details [77..184] PSI-BLAST 12.69897 Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1
    3 View Details [185..293] FFAS03 1.78 Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle