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View Structure Prediction Details

Protein: MPI1_ARATH
Organism: Arabidopsis thaliana
Length: 432 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MPI1_ARATH.

Description E-value Query
Range
Subject
Range
MPI2_ARATH - Mannose-6-phosphate isomerase 2 OS=Arabidopsis thaliana GN=PMI2 PE=1 SV=1
468.0 [0..4] [429..3]

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Predicted Domain #1
Region A:
Residues: [1-432]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIATVVKAN GGCEADRRRL RRLRCSVKDY DWGKIGSDSL VYRVYAANSD YEIDPTRPYA  60
   61 ELWMGTHESG PSYLEDADGS NGVTLRSWIT ENPKSLGNRV LEKWGCDLPF LFKVLSVARP 120
  121 LSIQAHPDKK LAKKMHKAHP NLYKDDNHKP EMALAYTQFE ALCGFIPLQE LKSVIRAIPE 180
  181 IEELVGSEEA NQVFCITEHD EEKVKSVVRT IFTLLMSADA DTTKKIVSKL KRRLHMESQE 240
  241 RQLTDKERLV LKLEKQYPND IGVISAFFFN YVKLNPGEAL YLGANEPHAY LFGECLEVMA 300
  301 TSDNVVRAGL TSKPLDIQTL CSMLSYKLGY PEILKGTRIR PYITRYLPPF EEFEVDLCDL 360
  361 PSGASTVFPS VPGPSLLLVL QGEGRMSTEA SADGISMGDV LFVPADTEIH LRSSSDLKLY 420
  421 RAGINSRFLF PL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 117.0
Match: 1pmiA
Description: HUMAN RANTES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.34748354759945 bayes_pls_golite062009
nucleic acid binding 1.03324343117049 bayes_pls_golite062009
transcription regulator activity 0.926308336563306 bayes_pls_golite062009
intramolecular oxidoreductase activity 0.8581504516071 bayes_pls_golite062009
DNA binding 0.748609148146118 bayes_pls_golite062009
catalytic activity 0.401988496917198 bayes_pls_golite062009
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen 0.353173877157675 bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting aldoses and ketoses 0.348782780143283 bayes_pls_golite062009
transcription factor activity 0.137510342474893 bayes_pls_golite062009
protein binding 0.0111341701600279 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle