| Protein: | gi|8778530, gi|2... |
| Organism: | Arabidopsis thaliana |
| Length: | 323 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|8778530, gi|2....
| Description | E-value | Query Range |
Subject Range |
|
|
215.0 | [0..15] | [243..1] |
|
|
213.0 | [0..15] | [270..1] |
|
|
211.0 | [0..15] | [270..1] |
|
|
211.0 | [0..15] | [270..1] |
|
|
211.0 | [0..6] | [271..2] |
|
|
211.0 | [0..15] | [271..1] |
|
|
210.0 | [0..15] | [241..1] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MQSSNVTDCT MRKRGTKRKI EIEKRMTKQQ RSVACSKRRP TLFSKAADLC LLSGANIAVF 60
61 VTSPDENSDV VYSFSGYSHA SEIVDCYLNN KSPPKTTINP ESA
|
| Detection Method: |  |
| Confidence: | 24.0 |
| Match: | 1tqeP |
| Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [104-248] |
1 11 21 31 41 51
| | | | | |
1 KFWWEEPDLY RDCDDLSELR IIEDRLMRTK KHLMDYLEKK EKSHSVSKSD QNPNNDSGSS 60
61 SSSSQIASDF GQNPSTLSPS SLKIVSFDQN SYSSLEPSSQ VTTCFDQNPV FSVGSESSSD 120
121 QSRYLVNEDS GFVDGLLCET EEENN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [249-323] |
1 11 21 31 41 51
| | | | | |
1 GMRLPQETQT QPMFTEEDQS FWENLDVDDV FGLFKDDNNL EVPLQDHSST NEDDELLIDI 60
61 SEYLSEEAME CPCFS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
