YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|8778530, gi|2...

General Information:
Name(s) found: gi|8778530 [NCBI NR]
gi|25405920 [NCBI NR]
gi|15221086 [NCBI NR]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • gi|8778530|gb|AAF79538.1|AC023673_26 F21D18.12 [Arabidopsis thaliana] [NCBI NR]
  • pir||F96521 protein F21D18.12 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15221086|ref|NP_175249.1| MADS-box protein (AGL74 ) [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 323 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: regulation of transcription, DNA-dependent [IEA]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSSNVTDCT MRKRGTKRKI EIEKRMTKQQ RSVACSKRRP TLFSKAADLC LLSGANIAVF  60
   61 VTSPDENSDV VYSFSGYSHA SEIVDCYLNN KSPPKTTINP ESAKFWWEEP DLYRDCDDLS 120
  121 ELRIIEDRLM RTKKHLMDYL EKKEKSHSVS KSDQNPNNDS GSSSSSSQIA SDFGQNPSTL 180
  181 SPSSLKIVSF DQNSYSSLEP SSQVTTCFDQ NPVFSVGSES SSDQSRYLVN EDSGFVDGLL 240
  241 CETEEENNGM RLPQETQTQP MFTEEDQSFW ENLDVDDVFG LFKDDNNLEV PLQDHSSTNE 300
  301 DDELLIDISE YLSEEAMECP CFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] PSI-BLAST 24.0 Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
    2 View Details [104..248] MSA 12.571996 View MSA. No confident structure predictions are available.
    3 View Details [249..323] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle