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View Structure Prediction Details

Protein: gi|15217717, gi|...
Organism: Arabidopsis thaliana
Length: 334 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15217717, gi|....

Description E-value Query
Range
Subject
Range
ENGA_PHOLL - GTP-binding protein engA OS=Photorhabdus luminescens subsp. laumondii GN=engA PE=3 SV=1
DER_PHOLL - GTPase Der OS=Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) GN=de...
247.0 [0..13] [300..206]

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Predicted Domain #1
Region A:
Residues: [1-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHSEQASAY KAVKNIVLVG RTGNGKSATG NSLIGKDVFV SEAKATGVTK TCQTYKAVTP  60
   61 GGSRINVIDT PGLFDLSVSA EFISKEIINC LRLAEGGLHV VVLVLSVRTR ITQEEENTLS 120
  121 TLQVLFGNEI LDYLIVLFTG GDELEANNQT LDDYFHQGCP YFLKTVLGLC DDRKVMFNNM 180
  181 TKDKHKKVEQ VQQFLALVAK VEERNEGKPF RGKMYLEIKE ETEWLKKQKK AVEASNLGEA 240
  241 ELAKMKKELQ MEHDTRMSQM EDMVKNMLKE TSAAHERMVS MLNENLENAH RENIDLRKAH 300
  301 DHEQKKRMMI QLGLGVPGAL GMIAPAALAM CSIL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.69897
Match: 1egaA
Description: GTPase Era, N-terminal domain; GTPase Era C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nucleoside-triphosphatase activity 0.166100211611062 bayes_pls_golite062009
pyrophosphatase activity 0.159702441149605 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.149170905385965 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.147838751017739 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle