| Protein: | PEX7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 317 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEX7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
349.0 | [0..3] | [315..1167] |
|
Region A: Residues: [1-317] |
1 11 21 31 41 51
| | | | | |
1 MPVFKAPFNG YSVKFSPFYE SRLAVATAQN FGILGNGRIH VLELAPGAPG VTESVSYDTA 60
61 DAVYDVCWSE SHDSVLIAAI GDGSVKIYDT ALPPPSNPIR SFQEHAREVQ SVDYNPTRRD 120
121 SFLTSSWDDT VKLWAMDRPA SVRTFKEHAY CVYQAVWNPK HGDVFASASG DCTLRIWDVR 180
181 EPGSTMIIPA HDFEILSCDW NKYDDCILAT SSVDKTVKVW DVRSYRVPLA VLNGHGYAVR 240
241 KVKFSPHRRS LIASCSYDMS VCLWDYMVED ALVGRYDHHT EFAVGIDMSV LVEGLMASTG 300
301 WDELVYVWQQ GMDPRAS
|
| Detection Method: |  |
| Confidence: | 69.0 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 3.31804728298431 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| tubulin binding | 2.76945430061825 | bayes_pls_golite062009 |
| microtubule binding | 2.72684103222924 | bayes_pls_golite062009 |
| dynein binding | 2.54821997913979 | bayes_pls_golite062009 |
| peroxisome targeting sequence binding | 2.43196533618619 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| dynactin binding | 1.85146647785657 | bayes_pls_golite062009 |
| actin filament binding | 1.5197243426595 | bayes_pls_golite062009 |
| peroxisome matrix targeting signal-2 binding | 1.26984584070766 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| microtubule plus-end binding | 1.01166033978052 | bayes_pls_golite062009 |
| transporter activity | 0.692270256454453 | bayes_pls_golite062009 |
| transcription regulator activity | 0.579815310385678 | bayes_pls_golite062009 |
| nucleic acid binding | 0.520265606469501 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.518364053507325 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.485054404024611 | bayes_pls_golite062009 |
| 0.45054027253231 | bayes_pls_golite062009 | |
| dynein intermediate chain binding | 0.443846546939402 | bayes_pls_golite062009 |
| snoRNA binding | 0.283655461357951 | bayes_pls_golite062009 |
| histone binding | 0.166694897714113 | bayes_pls_golite062009 |
| chromatin binding | 0.145491963066342 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.121183207943714 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| DNA binding | 0.0736878329528894 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
