| Protein: | TRPC_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 402 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRPC_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
337.0 | [0..9] | [394..101] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MEGLVPVQRL PIKVASPSLY RCNNSVSIRR SISGFAMDRK INFRAPSQFS IRAQQSDLKE 60
61 SLAVSSSSVE DKGNVLRIKE WEVEMYQEEL AISQGIRIRR KPPSKAPLGY SGPFELR
|
| Detection Method: |  |
| Confidence: | 26.09691 |
| Match: | 1i1qB |
| Description: | Anthranilate synthase GAT subunit, TrpG |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| anthranilate synthase activity | 2.75585393226063 | bayes_pls_golite062009 |
| oxo-acid-lyase activity | 1.86066620418318 | bayes_pls_golite062009 |
| catalytic activity | 1.67435536171189 | bayes_pls_golite062009 |
| ligase activity | 1.25010133890527 | bayes_pls_golite062009 |
| carbon-carbon lyase activity | 0.71617600377795 | bayes_pls_golite062009 |
| imidazoleglycerol-phosphate synthase activity | 0.52616972602552 | bayes_pls_golite062009 |
| carbon-nitrogen ligase activity, with glutamine as amido-N-donor | 0.113939560975652 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.100283432019111 | bayes_pls_golite062009 |
|
Region A: Residues: [118-402] |
1 11 21 31 41 51
| | | | | |
1 LHNNDADSPR NILEEITWYK DVEVSRMKEL NPLDVLKKAV EDAPPTRDFV GALRMAHKRT 60
61 GFPGLIAEVK KASPSRGILK ENFDPVEIAQ AYEKGGAACL SVLTDQKYFQ GGFENLEAIR 120
121 SAGVKCPLLC KEFVVDPWQI YYARTKGADA VLLIAAVLAD LEITFLLKIC KKLSLAALVE 180
181 VHDEREMGRV LGIEGIELVG INNRSLETFE VDISNTKKLL EGEHGRQIRE RDMIVVGESG 240
241 LFTPDDIAYV QAAGVKAVLV GESIVKQNDP EKGIAGLFGR NISHT
|
| Detection Method: | |
| Confidence: | 53.522879 |
| Match: | 1piiA |
| Description: | THREE-DIMENSIONAL STRUCTURE OF THE BIFUNCTIONAL ENZYME PHOSPHORIBOSYLANTHRANILATE ISOMERASE: INDOLEGLYCEROLPHOSPHATE SYNTHASE FROM ESCHERICHIA COLI REFINED AT 2.0 ANGSTROMS RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| tryptophan synthase activity | 3.15663465352598 | bayes_pls_golite062009 |
| indole-3-glycerol-phosphate synthase activity | 3.12120866545322 | bayes_pls_golite062009 |
| catalytic activity | 2.81275055404078 | bayes_pls_golite062009 |
| phosphoribosylanthranilate isomerase activity | 2.655130814615 | bayes_pls_golite062009 |
| carbon-carbon lyase activity | 2.44001937916931 | bayes_pls_golite062009 |
| carboxy-lyase activity | 1.80978905789979 | bayes_pls_golite062009 |
| lyase activity | 0.9228652996943 | bayes_pls_golite062009 |
| imidazoleglycerol-phosphate synthase activity | 0.82314869965119 | bayes_pls_golite062009 |
| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.302746738903759 | bayes_pls_golite062009 |
| isomerase activity | 0.14149405165663 | bayes_pls_golite062009 |
