| Protein: | TIP23_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 250 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIP23_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
255.0 | [0..1] | [242..1] |
|
Region A: Residues: [1-250] |
1 11 21 31 41 51
| | | | | |
1 MVKIEVGSVG DSFSVSSLKA YLSEFIATLL FVFAGVGSAV AFAKLTSDGA LDPAGLVAIA 60
61 IAHAFALFVG VSIAANISGG HLNPAVTLGL AIGGNITLIT GFFYWIAQCL GSIVACLLLV 120
121 FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI 180
181 VGANILAAGP FSGGSMNPAR SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY 240
241 EAVETREIRV
|
| Detection Method: |  |
| Confidence: | 54.045757 |
| Match: | 1fqyA |
| Description: | Aquaporin-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| water transmembrane transporter activity | 10.3414560257964 | bayes_pls_golite062009 |
| water channel activity | 10.2169080705067 | bayes_pls_golite062009 |
| transporter activity | 5.23077472964938 | bayes_pls_golite062009 |
| substrate-specific channel activity | 5.0695479460357 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 5.06520190871345 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 5.06054430984045 | bayes_pls_golite062009 |
| channel activity | 5.06054430984045 | bayes_pls_golite062009 |
| transmembrane transporter activity | 4.83314424546299 | bayes_pls_golite062009 |
| glycerol channel activity | 4.65460547189577 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.82456291801633 | bayes_pls_golite062009 |
| pyrimidine transmembrane transporter activity | 2.42183378687544 | bayes_pls_golite062009 |
| purine transmembrane transporter activity | 2.18556284655728 | bayes_pls_golite062009 |
| nucleobase transmembrane transporter activity | 2.18556284655728 | bayes_pls_golite062009 |
| binding | 1.09154723976574 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.820388351311438 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.820388351311438 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.545299611300918 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.516648340085278 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.315342449421593 | bayes_pls_golite062009 |
| protein binding | 0.179478120921785 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.141210715822635 | bayes_pls_golite062009 |
| urea transmembrane transporter activity | 0.0622228361021011 | bayes_pls_golite062009 |
| urea channel activity | 0.0622228361021011 | bayes_pls_golite062009 |
| amide transmembrane transporter activity | 0.0622228361021011 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.0368961725897963 | bayes_pls_golite062009 |
