YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: TRXH5_ARATH
Organism: Arabidopsis thaliana
Length: 118 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRXH5_ARATH.

Description E-value Query
Range
Subject
Range
gi|125489263, gi... - gi|40287476|gb|AAR83852.1| thioredoxin [Capsicum annuum], gi|125489263|gb|ABN42904.1| thioredoxin H-...
130.0 [0..3] [117..7]

Back

Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGEGEVIAC HTLEVWNEKV KDANESKKLI VIDFTASWCP PCRFIAPVFA EMAKKFTNVV  60
   61 FFKIDVDELQ AVAQEFKVEA MPTFVFMKEG NIIDRVVGAA KDEINEKLMK HGGLVASA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.0
Match: 1ti3A
Description: Solution structure of the Thioredoxin h1 from poplar, a CPPC active site variant
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
antioxidant activity 3.8464796631544 bayes_pls_golite062009
peroxidase activity 3.43831566988273 bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor 3.43831566988273 bayes_pls_golite062009
glutathione peroxidase activity 2.56524997297011 bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing S-S bonds 2.3913606099687 bayes_pls_golite062009
protein disulfide isomerase activity 2.3913606099687 bayes_pls_golite062009
protein-disulfide reductase activity 2.24066563461479 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 2.23310780102446 bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting keto- and enol-groups 2.18667085747706 bayes_pls_golite062009
peroxiredoxin activity 2.12777217096121 bayes_pls_golite062009
selenium binding 1.97148144306198 bayes_pls_golite062009
thioredoxin peroxidase activity 1.96134566495756 bayes_pls_golite062009
disulfide oxidoreductase activity 1.32811008894503 bayes_pls_golite062009
catalytic activity 0.672192331361968 bayes_pls_golite062009
binding 0.665189138843282 bayes_pls_golite062009
protein disulfide oxidoreductase activity 0.44918717550973 bayes_pls_golite062009
transferase activity 0.245320538630117 bayes_pls_golite062009
protein binding 0.157273259994554 bayes_pls_golite062009
transcription regulator activity 0.13699526678272 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle