| Protein: | T2AG_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 106 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for T2AG_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
169.0 | [0..1] | [106..1] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MATFELYRRS TIGMCLTETL DEMVQSGTLS PELAIQVLVQ FDKSMTEALE SQVKTKVSIK 60
61 GHLHTYRFCD NVWTFILQDA MFKSDDRQEN VSRVKIVACD SKLLTQ
|
| Detection Method: |  |
| Confidence: | 40.221849 |
| Match: | 1nvpD |
| Description: | HUMAN TFIIA/TBP/DNA COMPLEX |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 10.9702263885595 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 5.06993130505706 | bayes_pls_golite062009 |
| transcription regulator activity | 4.7915315980149 | bayes_pls_golite062009 |
| transcription activator activity | 2.75298328621175 | bayes_pls_golite062009 |
| nucleic acid binding | 2.26583234267697 | bayes_pls_golite062009 |
| DNA binding | 2.12151270115091 | bayes_pls_golite062009 |
| transcription coactivator activity | 2.10703866415858 | bayes_pls_golite062009 |
| binding | 1.9212205923594 | bayes_pls_golite062009 |
| protein binding | 1.54756881357956 | bayes_pls_golite062009 |
| transcription factor binding | 1.31659763916181 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.15899255380593 | bayes_pls_golite062009 |
