| Protein: | SYTM1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 709 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYTM1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
524.0 | [0..1] | [709..1] |
|
Region A: Residues: [1-73] |
1 11 21 31 41 51
| | | | | |
1 MLLRLTARSI RRFTTSSSSL PLLSSSSFCT VPTMAANHPK DEAYLSAVIP KRIKLFEQIQ 60
61 ANQLENLKSL PHD
|
| Detection Method: |  |
| Confidence: | 4.69897 |
| Match: | 1vj7A |
| Description: | Crystal structure of the bifunctional catalytic fragment of RelSeq, the RelA/SpoT homolog from Streptococcus equisimilis. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [74-709] |
1 11 21 31 41 51
| | | | | |
1 PIKVTLPDGN VKEGKKWETT PMDIAAQISK GLANSALISA VDDVLWDMNR PLEGDCKLEL 60
61 FKFDSDKGRD TLWHSSAHIL GQALEQEYGC QLCIGPCTTR GEGFYYDGFY GELGLSDNHF 120
121 PSIEAGAAKA AKEAQPFERI EVTKDQALEM FSENNFKVEL INGLPADMTI TVYRCGPLVD 180
181 LCRGPHIPNT SFVKAFKCLR ASSAYWKGDK DRESLQRVYG ISYPDQKQLK KYLQFLEEAK 240
241 KYDHRLLGQK QELFFSHQLS PGSYFFLPLG TRVYNRLMDF IKNQYWHRGY TEVITPNMYN 300
301 MELWQTSGHA DNYKDNMFTF NIEKQEFGLK PMNCPGHCLI FQHRVRSYRE LPMRLADFGV 360
361 LHRNEASGAL SGLTRVRRFQ QDDAHIFCTT EQVKGEVQGV LEFIDYVYKV FGFTYELKLS 420
421 TRPEKYLGDL ETWDKAEADL KEAIEAFGKP LVLNEGDGAF YGPKIDITVS DAMNRKFQCA 480
481 TLQLDFQLPI RFNLEYAAED EAKKSRPVMI HRAVLGSVER MFAILLEHYK GKWPFWISPR 540
541 QAIVCPISEK SQQYAEKVQK QIKDAGFYVD ADLTDRKIDK KVREAQLAQY NYILVVGETE 600
601 AATGQVSVRV RDNAAHSVKS IEDLLEEFKA KTAEFV
|
| Detection Method: | |
| Confidence: | 138.0 |
| Match: | 1qf6A |
| Description: | Threonyl-tRNA synthetase (ThrRS), C-terminal domain; Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain; Threonyl-tRNA synthetase (ThrRS), second 'additional' domain; Threonyl-tRNA synthetase (ThrRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.89468709683036 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.89468709683036 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.88410036819636 | bayes_pls_golite062009 |
| ligase activity | 6.92073480193262 | bayes_pls_golite062009 |
| threonine-tRNA ligase activity | 6.47381405106149 | bayes_pls_golite062009 |
| phenylalanine-tRNA ligase activity | 2.99105702052936 | bayes_pls_golite062009 |
| serine-tRNA ligase activity | 2.46505535069103 | bayes_pls_golite062009 |
| glycine-tRNA ligase activity | 2.29229136935761 | bayes_pls_golite062009 |
| catalytic activity | 1.99372273395202 | bayes_pls_golite062009 |
| alanine-tRNA ligase activity | 1.82594054955281 | bayes_pls_golite062009 |
| lysine-tRNA ligase activity | 1.72324031407565 | bayes_pls_golite062009 |
| histidine-tRNA ligase activity | 1.72215103383322 | bayes_pls_golite062009 |
| binding | 1.11470390774037 | bayes_pls_golite062009 |
| transcription regulator activity | 1.0753492604686 | bayes_pls_golite062009 |
| asparagine-tRNA ligase activity | 0.921492123574877 | bayes_pls_golite062009 |
| nucleic acid binding | 0.897558352141977 | bayes_pls_golite062009 |
| DNA binding | 0.854148126675211 | bayes_pls_golite062009 |
| transcription repressor activity | 0.55217603492525 | bayes_pls_golite062009 |
| transcription factor activity | 0.283508546234551 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 0.00572514744734753 | bayes_pls_golite062009 |
