| Protein: | SEP3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 251 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEP3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
258.0 | [0..1] | [251..1] |
|
|
249.0 | [0..1] | [244..1] |
|
|
249.0 | [0..1] | [245..1] |
|
|
246.0 | [0..1] | [245..1] |
|
|
244.0 | [0..1] | [244..1] |
|
|
243.0 | [0..1] | [245..1] |
|
|
242.0 | [0..1] | [245..1] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS 60
61 SSMLRTLERY QKCNYGAPEP
|
| Detection Method: |  |
| Confidence: | 20.30103 |
| Match: | 1tqeP |
| Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [81-177] |
1 11 21 31 41 51
| | | | | |
1 NVPSREALAV ELSSQQEYLK LKERYDALQR TQRNLLGEDL GPLSTKELES LERQLDSSLK 60
61 QIRALRTQFM LDQLNDLQSK ERMLTETNKT LRLRLAD
|
| Detection Method: | |
| Confidence: | 31.017729 |
| Match: | PF01486.8 |
| Description: | No description for PF01486.8 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.948 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
|
Region A: Residues: [178-251] |
1 11 21 31 41 51
| | | | | |
1 GYQMPLQLNP NQEEVDHYGR HHHQQQQHSQ AFFQPLECEP ILQIGYQGQQ DGMGAGPSVN 60
61 NYMLGWLPYD TNSI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
