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Protein Overview: SEP3_ARATH

General Information:
Name(s) found: SEP3_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 251 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: specification of floral organ identity [IMP]
    flower development [TAS]
    regulation of transcription, DNA-dependent [ISS]
    specification of floral organ number [IMP]
    cell fate specification [IMP]
    ovule development [IMP]
    Molecular Function: DNA binding [IDA][ISS]
    transcription factor activity [ISS][TAS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS  60
   61 SSMLRTLERY QKCNYGAPEP NVPSREALAV ELSSQQEYLK LKERYDALQR TQRNLLGEDL 120
  121 GPLSTKELES LERQLDSSLK QIRALRTQFM LDQLNDLQSK ERMLTETNKT LRLRLADGYQ 180
  181 MPLQLNPNQE EVDHYGRHHH QQQQHSQAFF QPLECEPILQ IGYQGQQDGM GAGPSVNNYM 240
  241 LGWLPYDTNS I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] PSI-BLAST 20.30103 Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
    2 View Details [81..177] Pfam 31.017729 No description for PF01486.8 was found. Confident ab initio structure predictions are available.
    3 View Details [178..251] MSA 1.424996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle