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Protein Overview: gi|21593845, gi|...

General Information:
Name(s) found: gi|30688808 [NCBI NR]
gi|21593845 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|30688808|ref|NP_850953.1| SEP3 (SEPALLATA3); DNA binding / protein binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|21593845|gb|AAM65812.1| putative floral homeotic protein, AGL9 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 250 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS  60
   61 SSMLRTLERY QKCNYGAPEP NVPSREALAE LSSQQEYLKL KERYDALQRT QRNLLGEDLG 120
  121 PLSTKELESL ERQLDSSLKQ IRALRTQFML DQLNDLQSKE RMLTETNKTL RLRLADGYQM 180
  181 PLQLNPNQEE VDHYGRHHHQ QQQHSQAFFQ PLECEPILQI GYQGQQDGMG AGPSVNNYML 240
  241 GWLPYDTNSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] PSI-BLAST 19.69897 Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
    2 View Details [89..184] Pfam 32.522879 No description for PF01486.8 was found. Confident ab initio structure predictions are available.
    3 View Details [185..250] MSA 1.409995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle