| Protein: | AGO10_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 988 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGO10_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1050.0 | [0..1] | [988..1] |
|
|
1008.0 | [0..16] | [988..67] |
|
|
998.0 | [0..15] | [988..91] |
|
|
990.0 | [0..10] | [987..49] |
|
|
988.0 | [0..2] | [987..84] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MPIRQMKDSS ETHLVIKTQP LKHHNPKTVQ NGKIPPPSPS PVTVTTPATV TQSQASSPSP 60
61 PSKNRSRRRN RGGRKSDQGD VCMRPSSRPR KPPPPSQTTS SAVSVATAGE IVAVNHQMQM 120
121 GVRKNSNFAP RPGFGTLGTK CIVKANHFLA D
|
| Detection Method: |  |
| Confidence: | 10.30103 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [152-318] |
1 11 21 31 41 51
| | | | | |
1 LPTKDLNQYD VTITPEVSSK SVNRAIIAEL VRLYKESDLG RRLPAYDGRK SLYTAGELPF 60
61 TWKEFSVKIV DEDDGIINGP KRERSYKVAI KFVARANMHH LGEFLAGKRA DCPQEAVQIL 120
121 DIVLRELSVK RFCPVGRSFF SPDIKTPQRL GEGLESWCGF YQSIRPT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [319-531] |
1 11 21 31 41 51
| | | | | |
1 QMGLSLNIDM ASAAFIEPLP VIEFVAQLLG KDVLSKPLSD SDRVKIKKGL RGVKVEVTHR 60
61 ANVRRKYRVA GLTTQPTREL MFPVDENCTM KSVIEYFQEM YGFTIQHTHL PCLQVGNQKK 120
121 ASYLPMEACK IVEGQRYTKR LNEKQITALL KVTCQRPRDR ENDILRTVQH NAYDQDPYAK 180
181 EFGMNISEKL ASVEARILPA PWLKYHENGK EKD
|
| Detection Method: | |
| Confidence: | 43.522879 |
| Match: | 1r4kA |
| Description: | Solution Structure of the Drosophila Argonaute 1 PAZ Domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [532-618] |
1 11 21 31 41 51
| | | | | |
1 CLPQVGQWNM MNKKMINGMT VSRWACVNFS RSVQENVARG FCNELGQMCE VSGMEFNPEP 60
61 VIPIYSARPD QVEKALKHVY HTSMNKT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [619-988] |
1 11 21 31 41 51
| | | | | |
1 KGKELELLLA ILPDNNGSLY GDLKRICETE LGLISQCCLT KHVFKISKQY LANVSLKINV 60
61 KMGGRNTVLV DAISCRIPLV SDIPTIIFGA DVTHPENGEE SSPSIAAVVA SQDWPEVTKY 120
121 AGLVCAQAHR QELIQDLYKT WQDPVRGTVS GGMIRDLLIS FRKATGQKPL RIIFYRDGVS 180
181 EGQFYQVLLY ELDAIRKACA SLEPNYQPPV TFIVVQKRHH TRLFANNHRD KNSTDRSGNI 240
241 LPGTVVDTKI CHPTEFDFYL CSHAGIQGTS RPAHYHVLWD ENNFTADGIQ SLTNNLCYTY 300
301 ARCTRSVSIV PPAYYAHLAA FRARFYLEPE IMQDNGSPGK KNTKTTTVGD VGVKPLPALK 360
361 ENVKRVMFYC
|
| Detection Method: | |
| Confidence: | 10.221849 |
| Match: | 3dlbA |
| Description: | No description for 3dlbA was found. |
