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Protein Overview: AGO1A_ORYSJ

General Information:
Name(s) found: AGO1A_ORYSJ [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • Protein argonaute 1A OS=Oryza sativa subsp. japonica GN=AGO1A PE=2 SV=1 [Swiss-Prot]
    • Organism: Oryza sativa Japonica Group
    Length: 1082 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFQLDNGYY SHQALAMMRK KKTEPRNAGE SSGTQQATGA PGRGPSQRPE RAQQHGGGGW  60
   61 QPANPQYAQQ AGRGGGQHQG RGGRYQGRGG PTSHQPGGGP VEYQAHEYYG RGVQRQGGMP 120
  121 QHRSGSGGHG VPASPSRTVP ELHQASQDQY QATVVAPSPS RTGPSSLPVE ASSEEVQHQF 180
  181 QELAIQGQSP TSQAIQPAPP SSKSVRFPMR PGKGTFGDRC IVKANHFFAE LPDKDLHQYD 240
  241 VSITPEVPSR GVNRAVIGEI VTQYRQSHLG GRLPVYDGRK SLYTAGPLPF TSRTFDVILQ 300
  301 DEEESLAVGQ GAQRRERPFK VVIKFAARAD LHHLAMFLAG RQADAPQEAL QVLDIVLREL 360
  361 PTARYSPVAR SFYSPNLGRR QQLGEGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEPLP 420
  421 VIDFVAQLLN RDISVRPLSD ADRVKIKKAL RGVKVEVTHR GNMRRKYRIS GLTSQATREL 480
  481 SFPIDNHGTV KTVVQYFQET YGFNIKHTTL PCLQVGNQQR PNYLPMEVCK IVEGQRYSKR 540
  541 LNEKQITALL KVTCQRPQER ELDILQTVHH NAYHQDPYAQ EFGIRIDERL ASVEARVLPP 600
  601 PWLKYHDSGR EKDVLPRIGQ WNMMNKKMVN GGRVNNWTCI NFSRHVQDNA ARSFCRELAI 660
  661 MCQISGMDFS IDPVVPLVTA RPEHVERALK ARYQEAMNIL KPQGGELDLL IAILPDNNGS 720
  721 LYGDLKRICE TDLGLVSQCC LTKHVFKMSK QYLANVALKI NVKVGGRNTV LVDALTRRIP 780
  781 LVSDRPTIIF GADVTHPHPG EDSSPSIAAV VASQDWPEVT KYAGLVSAQA HRQELIQDLF 840
  841 KVWKDPQRGT VSGGMIRELL ISFKRATGQK PQRIIFYRDG VSEGQFYQVL FYELDAIRKA 900
  901 CASLEADYQP PVTFVVVQKR HHTRLFANNH KDQRTVDRSG NILPGTVVDS KICHPTEFDF 960
  961 YLCSHAGIQG TSRPAHYHVL WDENKFTADG LQTLTNNLCY TYARCTRSVS IVPPAYYAHL1020
 1021 AAFRARFYME PDTSDSGSMA SGAHTRGGGP LPGARSTKPA GNVAVRPLPD LKENVKRVMF1080
 1081 YC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..231] PSI-BLAST 35.09691 No description for 1y0fA was found.
    2 View Details [232..434] PSI-BLAST 8.522879 Noncollagenous (NC1) domain of collagen IV
    3 View Details [435..608] PSI-BLAST 50.69897 Solution Structure of the Drosophila Argonaute 1 PAZ Domain
    4 View Details [609..813] PSI-BLAST 6.522879 The Structure of a Piwi protein from Archaeoglobus fulgidus.
    5 View Details [814..1082] PSI-BLAST 5.69897 No description for 3dlbA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle