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View Structure Prediction Details

Protein: METE1_ARATH
Organism: Arabidopsis thaliana
Length: 765 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for METE1_ARATH.

Description E-value Query
Range
Subject
Range
gi|14532772 - gi|14532772|gb|AAK64167.1| putative methionine synthase [Arabidopsis thaliana]
1020.0 [0..1] [765..1]

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Predicted Domain #1
Region A:
Residues: [1-765]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASHIVGYPR MGPKRELKFA LESFWDGKST AEDLQKVSAD LRSSIWKQMS AAGTKFIPSN  60
   61 TFAHYDQVLD TTAMLGAVPP RYGYTGGEIG LDVYFSMARG NASVPAMEMT KWFDTNYHYI 120
  121 VPELGPEVNF SYASHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKAAKG VDKSFELLSL 180
  181 LPKILPIYKE VITELKAAGA TWIQLDEPVL VMDLEGQKLQ AFTGAYAELE STLSGLNVLV 240
  241 ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTLDLVKA GFPEGKYLFA GVVDGRNIWA 300
  301 NDFAASLSTL QALEGIVGKD KLVVSTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE 360
  361 VNALAKALAG QKDEALFSAN AAALASRRSS PRVTNEGVQK AAAALKGSDH RRATNVSARL 420
  421 DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKVSE EDYVKAIKEE IKKVVDLQEE 480
  481 LDIDVLVHGE PERNDMVEYF GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKAMTV 540
  541 FWSAMAQSMT SRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG 600
  601 VIQIDEAALR EGLPLRKSEH AFYLDWAVHS FRITNCGVQD STQIHTHMCY SHFNDIIHSI 660
  661 IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI HSPRIPSSEE IADRVNKMLA 720
  721 VLEQNILWVN PDCGLKTRKY TEVKPALKNM VDAAKLIRSQ LASAK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1u1hA
Description: A. thaliana cobalamine independent methionine synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity 6.40786073037099 bayes_pls_golite062009
5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity 6.40786073037099 bayes_pls_golite062009
uroporphyrinogen decarboxylase activity 3.13638443707338 bayes_pls_golite062009
S-methyltransferase activity 3.0142199413027 bayes_pls_golite062009
catalytic activity 2.37862248560593 bayes_pls_golite062009
binding 1.590130518929 bayes_pls_golite062009
carbon-carbon lyase activity 1.54242506764415 bayes_pls_golite062009
carboxy-lyase activity 1.52150758949987 bayes_pls_golite062009
lyase activity 0.825209465219608 bayes_pls_golite062009
protein binding 0.21865699924356 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle