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View Structure Prediction Details

Protein: LOX2_ARATH
Organism: Arabidopsis thaliana
Length: 896 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LOX2_ARATH.

Description E-value Query
Range
Subject
Range
gi|17065070 - gi|17065070|gb|AAL32689.1| lipoxygenase AtLOX2 [Arabidopsis thaliana]
1319.0 [0..1] [896..1]

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Predicted Domain #1
Region A:
Residues: [1-896]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYCRESLSSL QTLNVAKSLS SLFPKQSALI NPISAGRRNN LPRPNLRRRC KVTASRANIE  60
   61 QEGNTVKEPI QNIKVKGYIT AQEEFLEGIT WSRGLDDIAD IRGRSLLVEL ISAKTDQRIT 120
  121 VEDYAQRVWA EAPDEKYECE FEMPEDFGPV GAIKIQNQYH RQLFLKGVEL KLPGGSITFT 180
  181 CESWVAPKSV DPTKRIFFSD KSYLPSQTPE PLKKYRKEEL ETLQGKNREE VGEFTKFERI 240
  241 YDYDVYNDVG DPDNDPELAR PVIGGLTHPY PRRCKTGRKP CETDPSSEQR YGGEFYVPRD 300
  301 EEFSTAKGTS FTGKAVLAAL PSIFPQIESV LLSPQEPFPH FKAIQNLFEE GIQLPKDAGL 360
  361 LPLLPRIIKA LGEAQDDILQ FDAPVLINRD RFSWLRDDEF ARQTLAGLNP YSIQLVEEWP 420
  421 LISKLDPAVY GDPTSLITWE IVEREVKGNM TVDEALKNKR LFVLDYHDLL LPYVNKVREL 480
  481 NNTTLYASRT LFFLSDDSTL RPVAIELTCP PNINKPQWKQ VFTPGYDATS CWLWNLAKTH 540
  541 AISHDAGYHQ LISHWLRTHA CTEPYIIAAN RQLSAMHPIY RLLHPHFRYT MEINARARQS 600
  601 LVNGGGIIET CFWPGKYALE LSSAVYGKLW RFDQEGLPAD LIKRGLAEED KTAEHGVRLT 660
  661 IPDYPFANDG LILWDAIKEW VTDYVKHYYP DEELITSDEE LQGWWSEVRN IGHGDKKDEP 720
  721 WWPVLKTQDD LIGVVTTIAW VTSGHHAAVN FGQYGYGGYF PNRPTTTRIR MPTEDPTDEA 780
  781 LKEFYESPEK VLLKTYPSQK QATLVMVTLD LLSTHSPDEE YIGEQQEASW ANEPVINAAF 840
  841 ERFKGKLQYL EGVIDERNVN ITLKNRAGAG VVKYELLKPT SEHGVTGMGV PYSISI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1hu9A
Description: Lipoxigenase, C-terminal domain; Plant lipoxigenase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
arachidonate 5-lipoxygenase activity 8.44515061433916 bayes_pls_golite062009
arachidonate 12-lipoxygenase activity 6.08213265273158 bayes_pls_golite062009
hepoxilin-epoxide hydrolase activity 4.96120669616017 bayes_pls_golite062009
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen 3.68734614042811 bayes_pls_golite062009
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen 3.61969258161886 bayes_pls_golite062009
dioxygenase activity 3.30721216596384 bayes_pls_golite062009
binding 1.8976030946043 bayes_pls_golite062009
protein binding 1.53930087292625 bayes_pls_golite062009
catalytic activity 1.04649784555215 bayes_pls_golite062009
arachidonate 15-lipoxygenase activity 0.440928568408097 bayes_pls_golite062009
ether hydrolase activity 0.0770523899606701 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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