| Protein: | KAT3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 662 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KAT3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
389.0 | [0..1] | [662..1] |
|
Region A: Residues: [1-370] |
1 11 21 31 41 51
| | | | | |
1 MSTTTTEARS PLPLLLRRGR SSTALSASTA EARSPLSILQ FRRRSSKDVR NITSVSSSLL 60
61 PAFGTFIEDD NPSSKPFIVL HFDRRYRLWE LFLVILVGYS AWASLFELAF EKAAEGALLT 120
121 IDLVVDFFFA VDIILTFFVS YLDNTTYLNV TDHKLIAKRY LKSVAFVMDV ASTLPIQFIY 180
181 KTITGDVGRG QAFGFLNLLR LWRLRRVAEL FKRLEKDAHF NYFVIRVIKL LCVTIFWIHL 240
241 AGCILYWIAY HYPRPTDTWI GSQVEDFKER SVWLGYTYSM YWSIVTLTTV GYGDLHAVNS 300
301 REKTFNMFYM LFNIGLTSYI IGIMTNLVVH GALRTFAMRS AINDILRYTS KNRLPDTMRE 360
361 QMLAHMQLKF
|
| Detection Method: |  |
| Confidence: | 49.0 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [371-662] |
1 11 21 31 41 51
| | | | | |
1 KTAELRQEEV LQDLPKAIRS SINQHLFRSI IEEAYLFKGF PEGLLVQLVS QIQAEYFPPK 60
61 MEIILQNEIP TDFYVIVSGG VDIIASKGVS EQVLAKLGPG SMAGEIGVVF NIPQPFTVRT 120
121 RRLSQVIRIG HHKFKEMVQS DNDVDAKMII ANFMTYLKGL NDELKKEIPF LRDLLDDADA 180
181 QVQETVQSEE TPQSNDEEIV TVSRHENGQI EERRREGVPK RVIIHGQAPP NQDNKNNGDS 240
241 NGRLIILPDS IQLLFDLAEK KLGKRGSTIA MADGAHVEQI DALRENDHLY IF
|
| Detection Method: | |
| Confidence: | 32.221849 |
| Match: | 1cx4A |
| Description: | Regulatory subunit of Protein kinase A |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cyclic nucleotide-gated ion channel activity | 9.28636958853471 | bayes_pls_golite062009 |
| intracellular cyclic nucleotide activated cation channel activity | 9.28636958853471 | bayes_pls_golite062009 |
| intracellular cGMP activated cation channel activity | 9.19973076787954 | bayes_pls_golite062009 |
| intracellular ligand-gated ion channel activity | 8.92326348606261 | bayes_pls_golite062009 |
| cGMP binding | 7.7575871125398 | bayes_pls_golite062009 |
| cyclic nucleotide binding | 7.37322432929433 | bayes_pls_golite062009 |
| GMP binding | 5.49455172024846 | bayes_pls_golite062009 |
| ligand-gated channel activity | 2.24160712920592 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 2.24160712920592 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.1641765932136 | bayes_pls_golite062009 |
| ion channel activity | 1.99113461395381 | bayes_pls_golite062009 |
| gated channel activity | 1.96880619620616 | bayes_pls_golite062009 |
| channel activity | 1.95481941885364 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 1.95481941885364 | bayes_pls_golite062009 |
| substrate-specific channel activity | 1.9532743483506 | bayes_pls_golite062009 |
| cation channel activity | 1.8875306855156 | bayes_pls_golite062009 |
| binding | 1.03706428234992 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.745476294699195 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.646885146396875 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.582561336941853 | bayes_pls_golite062009 |
| protein binding | 0.560659365968498 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.489669604147601 | bayes_pls_golite062009 |
| transporter activity | 0.232363663369302 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.209203009093296 | bayes_pls_golite062009 |
