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View Structure Prediction Details

Protein: GSA2_ARATH
Organism: Arabidopsis thaliana
Length: 472 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GSA2_ARATH.

Description E-value Query
Range
Subject
Range
gi|498914 - gi|498914|gb|AAA79123.1| glutamate-1-semialdehyde aminotransferase
440.0 [0..1] [472..1]

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Predicted Domain #1
Region A:
Residues: [1-472]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATLTGSGI ALGFSCSAKF SKRASSSSNR RCIKMSVSVE EKTKKFTLQK SEEAFNAAKN  60
   61 LMPGGVNSPV RAFKSVGGQP VVMDSAKGSR IRDIDGNEYI DYVGSWGPAI IGHADDEVLA 120
  121 ALAETMKKGT SFGAPCLLEN VLAEMVISAV PSIEMVRFVN SGTEACMGVL RLARAFTGKQ 180
  181 KFIKFEGCYH GHANSFLVKA GSGVATLGLP DSPGVPKAAT SDTLTAPYND IAAVEKLFEA 240
  241 NKGEIAAIIL EPVVGNSGFI TPKPEFIEGI RRITKDNGAL LIFDEVMTGF RLAYGGAQEY 300
  301 FGITPDLTTL GKIIGGGLPV GAYGGRRDIM EMVAPAGPMY QAGTLSGNPL AMTAGIHTLK 360
  361 RLSQPGTYEY LDKITKELTN GILEAGKKTG HAMCGGYISG MFGFFFTEGP VYDFSDAKKS 420
  421 DTEKFGKFFR GMLEEGVYLA PSQFEAGFTS LAHTSEDIQF TIAAAEKVLS RL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 113.0
Match: 2gsaA
Description: Glutamate-1-semialdehyde aminomutase (aminotransferase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
4-aminobutyrate transaminase activity 3.63797881096751 bayes_pls_golite062009
catalytic activity 2.29878871754893 bayes_pls_golite062009
5-aminolevulinate synthase activity 1.85905571238884 bayes_pls_golite062009
adenosylmethionine-8-amino-7-oxononanoate transaminase activity 1.74778109525713 bayes_pls_golite062009
N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity 1.4383564662931 bayes_pls_golite062009
L-aspartate:2-oxoglutarate aminotransferase activity 1.29936025406628 bayes_pls_golite062009
transferase activity, transferring nitrogenous groups 1.28316822767388 bayes_pls_golite062009
transaminase activity 1.24990480711889 bayes_pls_golite062009
succinate-semialdehyde dehydrogenase binding 0.78144409237642 bayes_pls_golite062009
transferase activity 0.737426388870721 bayes_pls_golite062009
carbon-sulfur lyase activity 0.698312655247044 bayes_pls_golite062009
intramolecular transferase activity, transferring amino groups 0.659071155545801 bayes_pls_golite062009
N-succinyltransferase activity 0.52897097514616 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.319452731970428 bayes_pls_golite062009
cystathionine beta-lyase activity 0.15938456446406 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 0.15024612852051 bayes_pls_golite062009
glycine dehydrogenase (decarboxylating) activity 0.15024612852051 bayes_pls_golite062009
sulfurtransferase activity 0.0450490929307473 bayes_pls_golite062009

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