| Protein: | EMF2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 631 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EMF2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
962.0 | [0..1] | [631..1] |
|
|
961.0 | [0..1] | [630..1] |
|
|
938.0 | [0..1] | [630..1] |
|
|
935.0 | [0..21] | [629..1] |
|
|
927.0 | [0..1] | [630..1] |
|
|
926.0 | [0..1] | [630..1] |
|
|
915.0 | [0..1] | [630..1] |
|
|
893.0 | [0..1] | [630..1] |
|
|
843.0 | [0..1] | [630..1] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MPGIPLVSRE TSSCSRSTEQ MCHEDSRLRI SEEEEIAAEE SLAAYCKPVE LYNIIQRRAI 60
61 RNPLFLQRCL HYKIEAKHKR RIQMTVFLSG AIDAG
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [96-301] |
1 11 21 31 41 51
| | | | | |
1 VQTQKLFPLY ILLARLVSPK PVAEYSAVYR FSRACILTGG LGVDGVSQAQ ANFLLPDMNR 60
61 LALEAKSGSL AILFISFAGA QNSQFGIDSG KIHSGNIGGH CLWSKIPLQS LYASWQKSPN 120
121 MDLGQRVDTV SLVEMQPCFI KLKSMSEEKC VSIQVPSNPL TSSSPQQVQV TISAEEVGST 180
181 EKSPYSSFSY NDISSSSLLQ IIRLRT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [302-377] |
1 11 21 31 41 51
| | | | | |
1 GNVVFNYRYY NNKLQKTEVT EDFSCPFCLV KCASFKGLRY HLPSTHDLLN FEFWVTEEFQ 60
61 AVNVSLKTET MISKVN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.735 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.635 | d.15.12 | Description not found. |
| View | Download | 0.635 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.625 | d.15.1 | Ubiquitin-like |
| View | Download | 0.609 | d.15.1 | Ubiquitin-like |
| View | Download | 0.601 | d.15.1 | Ubiquitin-like |
| View | Download | 0.564 | d.15.1 | Ubiquitin-like |
| View | Download | 0.482 | d.15.1 | Ubiquitin-like |
|
Region A: Residues: [378-498] |
1 11 21 31 41 51
| | | | | |
1 EDDVDPKQQT FFFSSKKFRR RRQKSQVRSS RQGPHLGLGC EVLDKTDDAH SVRSEKSRIP 60
61 PGKHYERIGG AESGQRVPPG TSPADVQSCG DPDYVQSIAG STMLQFAKTR KISIERSDLR 120
121 N
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.434 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.298 | N/A | N/A | a.66.1 | Transducin (alpha subunit), insertion domain |
| View | Download | 0.216 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.216 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.206 | N/A | N/A | a.118.26 | Description not found. |
|
Region A: Residues: [499-631] |
1 11 21 31 41 51
| | | | | |
1 RSLLQKRQFF HSHRAQPMAL EQVLSDRDSE DEVDDDVADF EDRRMLDDFV DVTKDEKQMM 60
61 HMWNSFVRKQ RVLADGHIPW ACEAFSRLHG PIMVRTPHLI WCWRVFMVKL WNHGLLDART 120
121 MNNCNTFLEQ LQI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.871 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.805 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.803 | N/A | N/A | a.118.19 | Description not found. |
| View | Download | 0.780 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.780 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.714 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.612 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.603 | N/A | N/A | a.118.1 | ARM repeat |
