| Protein: | CSN8_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 197 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSN8_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
303.0 | [0..1] | [197..1] |
|
Region A: Residues: [1-197] |
1 11 21 31 41 51
| | | | | |
1 MDLSPVKEAL AAKSFDKIAD ICDTLMLQVA SEGIEYHDDW PYAIHLLGYF YVDDCDSARF 60
61 LWKRIPTAIK ERKPEVVAAW GIGQKLWTHD YAGVYEAIRG YDWSQEAKDM VAAFSDLYTK 120
121 RMFQLLLSAY STITIHDLAL FLGMTEDDAT TYVVENGWTV DAASQMASVK KQAVKREQKV 180
181 DSSKLQRLTE YVFHLEH
|
| Detection Method: |  |
| Confidence: | 27.045757 |
| Match: | 1rz4A |
| Description: | Crystal Structure of Human eIF3k |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.1896012443261 | bayes_pls_golite062009 |
| binding | 2.15024109065235 | bayes_pls_golite062009 |
| nucleic acid binding | 2.10453342985083 | bayes_pls_golite062009 |
| DNA binding | 2.09269818546884 | bayes_pls_golite062009 |
| transcription factor activity | 1.30414036385056 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.17338630996898 | bayes_pls_golite062009 |
