| Protein: | AS1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 367 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AS1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
333.0 | [0..1] | [363..1] |
|
Region A: Residues: [1-128] |
1 11 21 31 41 51
| | | | | |
1 MKERQRWSGE EDALLRAYVR QFGPREWHLV SERMNKPLNR DAKSCLERWK NYLKPGIKKG 60
61 SLTEEEQRLV IRLQEKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE EKESNKRVEP 120
121 IDESKYDR
|
| Detection Method: |  |
| Confidence: | 33.69897 |
| Match: | 1a5jA |
| Description: | CHICKEN B-MYB DNA BINDING DOMAIN, REPEAT 2 AND REPEAT3, NMR, 32 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [129-367] |
1 11 21 31 41 51
| | | | | |
1 ILESFAEKLV KERSNVVPAA AAAATVVMAN SNGGFLHSEQ QVQPPNPVIP PWLATSNNGN 60
61 NVVARPPSVT LTLSPSTVAA AAPQPPIPWL QQQQPERAEN GPGGLVLGSM MPSCSGSSES 120
121 VFLSELVECC RELEEGHRAW ADHKKEAAWR LRRLELQLES EKTCRQREKM EEIEAKMKAL 180
181 REEQKNAMEK IEGEYREQLV GLRRDAEAKD QKLADQWTSR HIRLTKFLEQ QMGCRLDRP
|
| Detection Method: | |
| Confidence: | 1.16 |
| Match: | 1rh1A |
| Description: | crystal structure of the cytotoxic bacterial protein colicin B at 2.5 A resolution |
Matching Structure (courtesy of the PDB): |
|
