| Protein: | AGO1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1048 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for AGO1_ARATH.
|
Region A: Residues: [1-203] |
1 11 21 31 41 51
| | | | | |
1 MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG 60
61 GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG RGGGPSSGPP QRQSVPELHQ 120
121 ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP 180
181 MRPGKGQSGK RCIVKANHFF AEL
|
| Detection Method: |  |
| Confidence: | 32.0 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [204-346] |
1 11 21 31 41 51
| | | | | |
1 PDKDLHHYDV TITPEVTSRG VNRAVMKQLV DNYRDSHLGS RLPAYDGRKS LYTAGPLPFN 60
61 SKEFRINLLD EEVGAGGQRR EREFKVVIKL VARADLHHLG MFLEGKQSDA PQEALQVLDI 120
121 VLRELPTSRY IPVGRSFYSP DIG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [347-580] |
1 11 21 31 41 51
| | | | | |
1 KKQSLGDGLE SWRGFYQSIR PTQMGLSLNI DMSSTAFIEA NPVIQFVCDL LNRDISSRPL 60
61 SDADRVKIKK ALRGVKVEVT HRGNMRRKYR ISGLTAVATR ELTFPVDERN TQKSVVEYFH 120
121 ETYGFRIQHT QLPCLQVGNS NRPNYLPMEV CKIVEGQRYS KRLNERQITA LLKVTCQRPI 180
181 DREKDILQTV QLNDYAKDNY AQEFGIKIST SLASVEARIL PPPWLKYHES GREG
|
| Detection Method: | |
| Confidence: | 45.39794 |
| Match: | 1r4kA |
| Description: | Solution Structure of the Drosophila Argonaute 1 PAZ Domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [581-669] |
1 11 21 31 41 51
| | | | | |
1 TCLPQVGQWN MMNKKMINGG TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE 60
61 PVLPPVSARP EQVEKVLKTR YHDATSKLS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [670-836] |
1 11 21 31 41 51
| | | | | |
1 QGKEIDLLIV ILPDNNGSLY GDLKRICETE LGIVSQCCLT KHVFKMSKQY MANVALKINV 60
61 KVGGRNTVLV DALSRRIPLV SDRPTIIFGA DVTHPHPGED SSPSIAAVVA SQDWPEITKY 120
121 AGLVCAQAHR QELIQDLFKE WKDPQKGVVT GGMIKELLIA FRRSTGH
|
| Detection Method: | |
| Confidence: | 6.0 |
| Match: | 1w9hA |
| Description: | The Structure of a Piwi protein from Archaeoglobus fulgidus. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [837-1048] |
1 11 21 31 41 51
| | | | | |
1 KPLRIIFYRD GVSEGQFYQV LLYELDAIRK ACASLEAGYQ PPVTFVVVQK RHHTRLFAQN 60
61 HNDRHSVDRS GNILPGTVVD SKICHPTEFD FYLCSHAGIQ GTSRPAHYHV LWDENNFTAD 120
121 GLQSLTNNLC YTYARCTRSV SIVPPAYYAH LAAFRARFYM EPETSDSGSM ASGSMARGGG 180
181 MAGRSTRGPN VNAAVRPLPA LKENVKRVMF YC
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 3dlbA |
| Description: | No description for 3dlbA was found. |
