YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE35438
Organism: Caenorhabditis elegans
Length: 437 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35438.

Description E-value Query
Range
Subject
Range
gi|77812998, gi|... - gi|77812998|ref|ZP_00812279.1| Endothelin-converting enzyme 1 [Shewanella putrefaciens CN-32], gi|77...
gi|124549858, gi... - gi|124549858|ref|ZP_01707862.1| peptidase M13 [Shewanella putrefaciens 200], gi|124507674|gb|EAY5179...
424.0 [0..4] [428..242]

Back

Predicted Domain #1
Region A:
Residues: [1-437]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLIILFCFL PTQNAYEHPF DFIENALEKI VDWKSDPCDD FYRHACPVGS IEDIIKVSMQ  60
   61 PLKDALNHSW KQKGQRNEGK VYNINFRRSH ICCHFFCKLL FIYYDYQYRF INYVTFYDGM 120
  121 LQPLYYHVEA NVTDGINEIH QMMEDMVELG NIWLEKTPWV INNNLTEEMK NITNAIKMPV 180
  181 SLTKYTNFIY NLLSPIETDF LNCVSEFEGI QNNTLFCLFY SAKIFVRTRG SYFIDDNGYN 240
  241 AEGTIYFGFP NYYHTTYGNW RASKLGYTGT RVGHEIGHTF IEHSINPDGL PYFSKPAEDC 300
  301 VQNQYLKTCN EYYEGEVPDA CNTSDYTFDD NGADVFGLQL AYAILERDLS DQLREQADGL 360
  361 KITNEQLLFY SFAYRFCRGS KSNTTDGSHS HHNVRINAVA QMPGFQQAFN CASDSRMMKS 420
  421 ATKQCVIYGN NAPETRK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 1dmtA
Description: Neutral endopeptidase (neprilysin)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.361128926739778 bayes_pls_golite062009
hydrolase activity 0.29183147920977 bayes_pls_golite062009
peptidase activity 0.23695590197447 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.0341081586881899 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle