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View Structure Prediction Details

Protein: wrs-1
Organism: Caenorhabditis elegans
Length: 417 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for wrs-1.

Description E-value Query
Range
Subject
Range
gi|32709 - gi|32709|emb|CAA44450.1| IFP53 [Homo sapiens]
426.0 [0..13] [417..64]

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Predicted Domain #1
Region A:
Residues: [1-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPAEQVAA EIENLKVNGG AAGGGVQEDE EDRVTPWEVT TTKATGIDYD KLIVKFGCRK  60
   61 LDEEIIARFE RVTGHKASPM LRRGMFFAHR DLTAILDRKE QGKPFYLYTG RGASSGSLHL 120
  121 GHLVPFIFTK WLQEVFDVPL VIQMTDDEKF LWKDMKVDEA KKMARENMKD IISVGFDPTK 180
  181 TFIFNNFDYM CPPFYENIVK IWKVVNTNQA RAIFGFTPED CLGKAAFPAV EAAPCFASSF 240
  241 PQIFGKRNDI PCLIPCAIDQ DPFFRMTRDV APRLKASKPS LIFSTFLPAL TGAQTKMSAS 300
  301 EPNTCIFLSD TAKQIKNKIN KYAFSGGQQT VQEHREKGGN CDVDISYQFL RFFLDDDEKL 360
  361 AEIRENYTKG EMLSGELKAL ATQKVQEIVL EMQERRKLVT DETVEEFVKV RPLAYKY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 119.0
Match: 1r6tA
Description: crystal structure of human tryptophanyl-tRNA synthetase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ligase activity, forming carbon-oxygen bonds 7.16276509815667 bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds 7.16276509815667 bayes_pls_golite062009
aminoacyl-tRNA ligase activity 7.13957775963187 bayes_pls_golite062009
ligase activity 6.11211476973434 bayes_pls_golite062009
tryptophan-tRNA ligase activity 5.34430928486195 bayes_pls_golite062009
glutamate-tRNA ligase activity 2.63681738794687 bayes_pls_golite062009
catalytic activity 2.37674226834122 bayes_pls_golite062009
methionine-tRNA ligase activity 2.01261843164558 bayes_pls_golite062009
tyrosine-tRNA ligase activity 1.88984817882585 bayes_pls_golite062009
arginine-tRNA ligase activity 1.13743634264647 bayes_pls_golite062009
cysteine-tRNA ligase activity 0.844943947059557 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.625793556381714 bayes_pls_golite062009
binding 0.27454602748467 bayes_pls_golite062009
nucleotidyltransferase activity 0.2293846471193 bayes_pls_golite062009
nucleic acid binding 0.161799496958314 bayes_pls_golite062009
glutamine-tRNA ligase activity 0.118292082006187 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle