| Protein: | paqr-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 581 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for paqr-2.
| Description | E-value | Query Range |
Subject Range |
|
|
420.0 | [0..1] | [581..1] |
|
Region A: Residues: [1-275] |
1 11 21 31 41 51
| | | | | |
1 MEEDDVESAT PAESQKLLQK SVRNSFDERD MVMVLDNDEL IMENRNSSNL QSPLRSVTDV 60
61 LREAENIITD GPLQLADTQE NQNVIVDQVD VQFPNSQPSD GQRFEIIVRH SKVVEQPASQ 120
121 QRDESMYVTR QNRLPTLLEG IEIDNGDVPS TSKAAALPFK KGHRRAWSMP NAKGEKMTVA 180
181 VIHDNHEEGG NQHRRRIVKY KLHPQRRGHE DGKHLRFVTA GHDAEIHLDH SDDDDELEVE 240
241 INEEEVIIPS ETGEGPRAVI KRFWEARWKA TNFET
|
| Detection Method: |  |
| Confidence: | 4.0 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [276-581] |
1 11 21 31 41 51
| | | | | |
1 LPEWLQDNEY LRTGHRPPLP SFSSCFKSIF ALHTETGNIW THMYGCVAFF GIGIWFLTRP 60
61 HDQMQWVEKL IYSAFFLGAV ICLGMSFLFH TVACHSIEMA KLFSKLDYTG ISLLIVGSFV 120
121 PWIYFAFYCR PQPMIIYNGM IIILGIAAMV VSLWDKFAEP KFRPVRAAVF IAMGLSAVVP 180
181 AFHLLVVDGV HYMVEESQVH LMIMMGAMYI GGATLYATRV PERCFPGKCD IWFQSHQLFH 240
241 TFVVLAAFVH YHAISQMGMH KLMKGSCPDQ LKTRYGNELN PSFVGTLLGL DEPLNVRDWT 300
301 PADVGL
|
| Detection Method: | |
| Confidence: | 91.0 |
| Match: | 1occA |
| Description: | Mitochondrial cytochrome c oxidase, subunit I |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cation transmembrane transporter activity | 4.35216255780959 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 4.28952433007809 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 4.263915637641 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 4.134797778797 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 3.52965693501334 | bayes_pls_golite062009 |
| catalytic activity | 1.95966890211023 | bayes_pls_golite062009 |
| heme-copper terminal oxidase activity | 1.27735515053931 | bayes_pls_golite062009 |
| binding | 1.12832931822264 | bayes_pls_golite062009 |
| cytochrome-c oxidase activity | 0.803860393147327 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on heme group of donors | 0.803860393147327 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on heme group of donors, oxygen as acceptor | 0.803860393147327 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.43239037074547 | bayes_pls_golite062009 |
| transporter activity | 0.37947088637216 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.36572623683433 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.30813504643539 | bayes_pls_golite062009 |
| protein binding | 0.235323288960659 | bayes_pls_golite062009 |
